RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 MAN2A1Q16706 1144 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 C2orf27AQ580R0 203 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 PMF1Q6P1K2 205 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 Q6ZNB5 142 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 TPGS1Q6ZTW0 290 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 SYT13Q7L8C5 426 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 WDR5BQ86VZ2 330 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 SFTPA1Q8IWL2 248 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 ETFBKMTQ8IXQ9 262 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 FAM81BQ96LP2 452 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 HHIPQ96QV1 700 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 CNGB3Q9NQW8 809 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 NCDNQ9UBB6 729 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 RAB23Q9ULC3 237 aa21.42■■□□□ 1.02
HDAC4-209ENST00000487617 SLC12A8A0AV02 714 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 GTPBP10A4D1E9 387 aaKnown RBP21.41■■□□□ 1.02
HDAC4-209ENST00000487617 YJEFN3A6XGL0 299 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 E7ENQ6 273 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 NEDD8-MDP1E9PL57 170 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 PIK3R2O00459 728 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 HRO43593 1189 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 TULP3O75386 442 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 PRKCSHP14314 528 aaPredicted RBP21.41■■□□□ 1.02
HDAC4-209ENST00000487617 CNR2P34972 360 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 APBA1Q02410 837 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 SRSF5Q13243 272 aaKnown RBP21.41■■□□□ 1.02
HDAC4-209ENST00000487617 SIM2Q14190 667 aaPredicted RBP21.41■■□□□ 1.02
HDAC4-209ENST00000487617 ARHGAP44Q17R89 818 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 HSP90AA4PQ58FG1 418 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 BSPRYQ5W0U4 402 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 PRR23BQ6ZRT6 265 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 SCML4Q8N228 414 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 CAMKK1Q8N5S9 505 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 RNF139Q8WU17 664 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 BBS2Q9BXC9 721 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 DCLK3Q9C098 648 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 OLA1Q9NTK5 396 aaKnown RBP21.41■■□□□ 1.02
HDAC4-209ENST00000487617 WDR35Q9P2L0 1181 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 DEC1Q9P2X7 70 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 APEX2Q9UBZ4 518 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 ZNF510Q9Y2H8 683 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 FAM186AA6NE01 2351 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 USP34Q70CQ2 3546 aa21.41■■□□□ 1.02
HDAC4-209ENST00000487617 VPS13AQ96RL7 3174 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 ANTXRLA6NF34 631 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 GABBR2O75899 941 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 KLKB1P03952 638 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 PON1P27169 355 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 CORO1AP31146 461 aaKnown RBP21.4■■□□□ 1.02
HDAC4-209ENST00000487617 DAOAP59103 153 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 LPAL2Q16609 132 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 PREPLQ4J6C6 727 aaPredicted RBP21.4■■□□□ 1.02
HDAC4-209ENST00000487617 CT47A1Q5JQC4 288 aaPredicted RBP21.4■■□□□ 1.02
HDAC4-209ENST00000487617 DCLK2Q8N568 766 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 CCDC33Q8N5R6 958 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 EDEM1Q92611 657 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 HSFY1Q96LI6 401 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 ABCC13Q9NSE7 274 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 MARK1Q9P0L2 795 aa21.4■■□□□ 1.02
HDAC4-209ENST00000487617 A0A0A0MRY4 1105 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 TBC1D3BA6NDS4 549 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 MED7O43513 233 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 LETM1O95202 739 aaPredicted RBP21.39■■□□□ 1.01
HDAC4-209ENST00000487617 TYRP14679 529 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 TIE1P35590 1138 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 USP8P40818 1118 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 TNFRSF4P43489 277 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 MRPS21P82921 87 aaKnown RBP21.39■■□□□ 1.01
HDAC4-209ENST00000487617 VWA3BQ502W6 1294 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 CEP68Q76N32 757 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 FMNL3Q8IVF7 1028 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 PHTF2Q8N3S3 785 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 BHMTQ93088 406 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 XPO6Q96QU8 1125 aaKnown RBP21.39■■□□□ 1.01
HDAC4-209ENST00000487617 TUBGCP2Q9BSJ2 902 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 NDST4Q9H3R1 872 aa21.39■■□□□ 1.01
HDAC4-209ENST00000487617 DNAJC17Q9NVM6 304 aaKnown RBP21.39■■□□□ 1.01
HDAC4-209ENST00000487617 ATG2BQ96BY7 2078 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 GPR179Q6PRD1 2367 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 CCDC163A0A0D9SF12 145 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 KCNJ18B7U540 433 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 THAP12O43422 761 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 APBB3O95704 486 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 GNA15P30679 374 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 KCNJ12Q14500 433 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 EMC10Q5UCC4 262 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 GRAMD4Q6IC98 578 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 DENND1BQ6P3S1 775 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 NUDT18Q6ZVK8 323 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 DENND1CQ8IV53 801 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 ALLCQ8N6M5 410 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 IRGQQ8WZA9 623 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 PLD4Q96BZ4 506 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 ST7Q9NRC1 585 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 SAMSN1Q9NSI8 373 aaKnown RBP21.38■■□□□ 1.01
HDAC4-209ENST00000487617 GMEB2Q9UKD1 530 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 AGO1Q9UL18 857 aaKnown RBP21.38■■□□□ 1.01
HDAC4-209ENST00000487617 MMP17Q9ULZ9 603 aa21.38■■□□□ 1.01
HDAC4-209ENST00000487617 BECN2A8MW95 431 aa21.37■■□□□ 1.01
HDAC4-209ENST00000487617 PES1O00541 588 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms