RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RUBCNQ92622 972 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 HSFY1Q96LI6 401 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 NT5C1BQ96P26 610 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 MED15Q96RN5 788 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 ARID3AQ99856 593 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 DCLK3Q9C098 648 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 CLSTN2Q9H4D0 955 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 CCSER2Q9H7U1 834 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 NMUR1Q9HB89 426 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 RBM12Q9NTZ6 932 aaKnown RBP7.37□□□□□ -1.23
VPS50-218ENST00000485994 OSER1Q9NX31 292 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 MARK1Q9P0L2 795 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 GMIPQ9P107 970 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 CFAP97Q9P2B7 532 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 EBF1Q9UH73 591 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 DNMT3LQ9UJW3 386 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 FBXO10Q9UK96 956 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS50-218ENST00000485994 WNT6Q9Y6F9 365 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 R4GN57 208 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 MYO16Q9Y6X6 1858 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 FRYLO94915 3013 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 PI4KAP42356 2102 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 A0A1W2PQH9 124 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.36□□□□□ -1.23
VPS50-218ENST00000485994 K7EQS6 105 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 RNF225M0QZC1 329 aaPredicted RBP7.36□□□□□ -1.23
VPS50-218ENST00000485994 O00370 1275 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 LRP3O75074 770 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 CLSTN1O94985 981 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 TBX18O95935 607 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 ZBED1O96006 694 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 ADH1CP00326 375 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 EGFP01133 1207 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 CYP17A1P05093 508 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 SETSIPP0DME0 302 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 GRIA2P42262 883 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 ZNF132P52740 706 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 BCAT1P54687 386 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 SATB1Q01826 763 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 PDE4CQ08493 712 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 GOLGA8FQ08AF8 430 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 GOLGA8DPQ0D2H9 430 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 IFRD2Q12894 506 aaPredicted RBP7.36□□□□□ -1.23
VPS50-218ENST00000485994 ORC1Q13415 861 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 CAMK4Q16566 473 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 LY6G5CQ5SRR4 150 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 TMEM270Q6UE05 265 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 BEND5Q7L4P6 421 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 PIGZQ86VD9 579 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 PHTF2Q8N3S3 785 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 STK32AQ8WU08 396 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 EZH1Q92800 747 aaPredicted RBP7.36□□□□□ -1.23
VPS50-218ENST00000485994 ACDQ96AP0 544 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 PNKPQ96T60 521 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 CNGB3Q9NQW8 809 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS50-218ENST00000485994 SPHK2Q9NRA0 654 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 OLA1Q9NTK5 396 aaKnown RBP7.36□□□□□ -1.23
VPS50-218ENST00000485994 LMBRD1Q9NUN5 540 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 WDR35Q9P2L0 1181 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 HESX1Q9UBX0 185 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 TSPAN16Q9UKR8 245 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 CTNND2Q9UQB3 1225 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 SH3BP1Q9Y3L3 701 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 STARD13Q9Y3M8 1113 aa7.36□□□□□ -1.23
VPS50-218ENST00000485994 EML5Q05BV3 1969 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 CYP26A1O43174 497 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 FOXD2O60548 495 aaPredicted RBP7.35□□□□□ -1.23
VPS50-218ENST00000485994 STC2O76061 302 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 APODP05090 189 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 ADH5P11766 374 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 CHKAP35790 457 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 GGCXP38435 758 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 KIR2DL1P43626 348 aaPredicted RBP7.35□□□□□ -1.23
VPS50-218ENST00000485994 SLC6A11P48066 632 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 TKTL1P51854 596 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 MFAP3P55082 362 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 STX17P56962 302 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 TRIP4Q15650 581 aaPredicted RBP7.35□□□□□ -1.23
VPS50-218ENST00000485994 LAIR1Q6GTX8 287 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 BLOC1S3Q6QNY0 202 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 TSSK4Q6SA08 328 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 TREML4Q6UXN2 200 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 Q6ZS52 159 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 RBM43Q6ZSC3 357 aaKnown RBP7.35□□□□□ -1.23
VPS50-218ENST00000485994 BHLHA9Q7RTU4 235 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 FAM217AQ8IXS0 508 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 PPM1KQ8N3J5 372 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 USP33Q8TEY7 942 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 IRGQQ8WZA9 623 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 TFAP2BQ92481 460 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 SECISBP2LQ93073 1101 aaKnown RBP7.35□□□□□ -1.23
VPS50-218ENST00000485994 AZIN2Q96A70 460 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 LOXL4Q96JB6 756 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 ZC3H10Q96K80 434 aaKnown RBP7.35□□□□□ -1.23
VPS50-218ENST00000485994 THAP9Q9H5L6 903 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 ABCC13Q9NSE7 274 aa7.35□□□□□ -1.23
VPS50-218ENST00000485994 SMPD4Q9NXE4 827 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms