RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ERAP1Q9NZ08 941 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 C2CD2Q9Y426 696 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 SHROOM2Q13796 1616 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 COL6A2P12110 1019 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 SPP2Q13103 211 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ARMC3Q5W041 872 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PLEKHA7Q6IQ23 1121 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 TDRPQ86YL5 185 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM71DQ8N9W8 422 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CDC26Q8NHZ8 85 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 TCP10LQ8TDR4 215 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 AGAP11Q8TF27 550 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 THUMPD3Q9BV44 507 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CLEC4MQ9H2X3 399 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 MYBP10242 640 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 RARAP10276 462 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 OLR1P78380 273 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PLOD1Q02809 727 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 TRAP1Q12931 704 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 GLRA4Q5JXX5 417 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 SPANXN3Q5MJ09 141 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 INTS11Q5TA45 600 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 FKBP1CQ5VVH2 108 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ZDHHC13Q8IUH4 622 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 KSR1Q8IVT5 923 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PARD3BQ8TEW8 1205 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 DIS3LQ8TF46 1054 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 HDAC7Q8WUI4 952 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM162AQ96A26 154 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 KAZALD1Q96I82 304 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PAIP1Q9H074 479 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PNPLA8Q9NP80 782 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 HPS4Q9NQG7 708 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 KCNH7Q9NS40 1196 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 GGA3Q9NZ52 723 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 BTBD3Q9Y2F9 522 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 C5orf60A6NFR6 353 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 LYPLA2O95372 231 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PLEKP08567 350 aaPredicted RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PGAM1P18669 254 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 EPHB2P29323 1055 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PMS1P54277 932 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 HADHBP55084 474 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ELAVL2Q12926 359 aaKnown RBP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 PDIA6Q15084 440 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ATF7IP2Q5U623 682 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CYP4Z1Q86W10 505 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 ADHFE1Q8IWW8 467 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 URGCPQ8TCY9 931 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 HSFY1Q96LI6 401 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CPNE1Q99829 537 aa6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRPF4B-205ENST00000480058 CLRN2A0PK11 232 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 CYBBP04839 570 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 RPS12P25398 132 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 GSTT1P30711 240 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 RENBPP51606 427 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 BNIP1Q12981 228 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 GTF2H3Q13889 308 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 C16orf72Q14CZ0 275 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 TBCELQ5QJ74 424 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 SPOUT1Q5T280 376 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 SDE2Q6IQ49 451 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 TRABD2AQ86V40 505 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 UNC93AQ86WB7 457 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 CPA5Q8WXQ8 436 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 SLITRK1Q96PX8 696 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 TSPAN18Q96SJ8 248 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 TARS2Q9BW92 718 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 UBP1Q9NZI7 540 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 DKK3Q9UBP4 350 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 GGT7Q9UJ14 662 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 TRMT6Q9UJA5 497 aaKnown RBP6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 CDH9Q9ULB4 789 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 DUSP10Q9Y6W6 482 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 NEURL4Q96JN8 1562 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC22A2O15244 555 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 ZSCAN9O15535 394 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 MGRN1O60291 552 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 CAPN15O75808 1086 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 CRTAMO95727 393 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 ATP4AP20648 1035 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 BRSK2Q8IWQ3 736 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 MYO1HQ8N1T3 1032 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 GALNT15Q8N3T1 639 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 GMCL1P1Q8NEA9 526 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 ART4Q93070 314 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 NKD2Q969F2 451 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 QKIQ96PU8 341 aaKnown RBP eCLIP6.32□□□□□ -1.47e-8■■■■■ 27.6
PRPF4B-205ENST00000480058 CPVLQ9H3G5 476 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 DBNDD1Q9H9R9 158 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 KLHL28Q9NXS3 571 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 UBAP1Q9NZ09 502 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 SAGE2PA6NJ88 616 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 C2orf81A6NN90 581 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 NEMP1O14524 444 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 TCEA3O75764 348 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 LCA5LO95447 670 aa6.32□□□□□ -1.4
PRPF4B-205ENST00000480058 FESP07332 822 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms