RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 CACNB3P54284 484 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 SLC12A2P55011 1212 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 RPS16P62249 146 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 IGBP1P78318 339 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 PPATQ06203 517 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 MTX1Q13505 466 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 BFSP2Q13515 415 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 KCNAB1Q14722 419 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 CNN3Q15417 329 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 SEC23BQ15437 767 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 FAM110CQ1W6H9 321 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 ARHGAP29Q52LW3 1261 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 ODR4Q5SWX8 454 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 MZT2AQ6P582 158 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 CCDC149Q6ZUS6 474 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 UEVLDQ8IX04 471 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 ANKRD13AQ8IZ07 590 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 C12orf76Q8N812 135 aaPredicted RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 PNPLA1Q8N8W4 532 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 SLC35G2Q8TBE7 412 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 SLC25A28Q96A46 364 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 TRMT61AQ96FX7 289 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 WDYHV1Q96HA8 205 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 VCPIP1Q96JH7 1222 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 ZFYVE19Q96K21 471 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 MARK4Q96L34 752 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 PPP1R10Q96QC0 940 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 EIF3CQ99613 913 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 HTATIP2Q9BUP3 242 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 TRIM5Q9C035 493 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 LRRC27Q9C0I9 530 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 MRPL44Q9H9J2 332 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 ZNF287Q9HBT7 754 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 TRIM36Q9NQ86 728 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 DECR2Q9NUI1 292 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 TBC1D23Q9NUY8 699 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 DNMT3BQ9UBC3 853 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 DNAJB11Q9UBS4 358 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 ZNF212Q9UDV6 495 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 IPO11Q9UI26 975 aaKnown RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 ANAPC4Q9UJX5 808 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 RIMKLBQ9ULI2 386 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 COG5Q9UP83 839 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 PCDHB2Q9Y5E7 798 aa1.7□□□□□ -2.14
SRRM1-211ENST00000478890 HEMK1Q9Y5R4 338 aaPredicted RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 SIRT4Q9Y6E7 314 aaPredicted RBP1.7□□□□□ -2.14
SRRM1-211ENST00000478890 IGLV5-39A0A0G2JS06 123 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TRIM43BA6NCK2 446 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TTC34A8MYJ7 566 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 ISM1B1AKI9 464 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 PRR23D1E9PI22 279 aaPredicted RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 AKAP10O43572 662 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 UGDHO60701 494 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TUSC2O75896 110 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 PLAUP00749 431 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 PDGFRBP09619 1106 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 PRR23D2P0DMB1 279 aaPredicted RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TMIGD3P0DMS9 266 aaPredicted RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 ST6GAL1P15907 406 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 DRD1P21728 446 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 MCM5P33992 734 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 GALNSP34059 522 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 ALDH7A1P49419 539 aaKnown RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 AGFG1P52594 562 aaKnown RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 EPHB1P54762 984 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 WDR5P61964 334 aaKnown RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 HTRA4P83105 476 aaPredicted RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TIAL1Q01085 375 aaKnown RBP eCLIP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 CFHR1Q03591 330 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 DEUP1Q05D60 604 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 MCL1Q07820 350 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TWIST1Q15672 202 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 CNGA2Q16280 664 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 CNGA3Q16281 694 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 P3H1Q32P28 736 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 MINDY4Q4G0A6 757 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 ZNF585BQ52M93 769 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 C9orf47Q6ZRZ4 202 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 RFX8Q6ZV50 586 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 FAM57BQ71RH2 274 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 MEPCEQ7L2J0 689 aaKnown RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 OVCH2Q7RTZ1 564 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TRAPPC11Q7Z392 1133 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 COL23A1Q86Y22 540 aaPredicted RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 CHPFQ8IZ52 775 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 MMP21Q8N119 569 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 LINC01465Q8N7H1 131 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 MPLKIPQ8TAP9 179 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 LRTOMTQ8WZ04 291 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 MAML1Q92585 1016 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 KAT2BQ92831 832 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 PMM1Q92871 262 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TRIM43Q96BQ3 446 aaPredicted RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 EDC3Q96F86 508 aaKnown RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 FCRL5Q96RD9 977 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 ZPBPQ9BS86 351 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 TUBB6Q9BUF5 446 aa1.69□□□□□ -2.14
SRRM1-211ENST00000478890 RTFDC1Q9BY42 306 aaPredicted RBP1.69□□□□□ -2.14
SRRM1-211ENST00000478890 C22orf23Q9BZE7 217 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms