RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 MRPL39Q9NYK5 338 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 RBAKQ9NYW8 714 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 USP20Q9Y2K6 914 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 GRIN2DO15399 1336 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 FRMPD4Q14CM0 1322 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 CHD4Q14839 1912 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SYNDIG1LA6NDD5 238 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 NEMP1O14524 444 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ABLIM1O14639 778 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 FSBPO95073 299 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ATP5BP06576 529 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 NPTX2P47972 431 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 FNTAP49354 379 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SESN2P58004 480 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 OLR1P78380 273 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SNX17Q15036 470 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 QPCTQ16769 361 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 BMT2Q1RMZ1 405 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SWT1Q5T5J6 900 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SNX30Q5VWJ9 437 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 DUPD1Q68J44 220 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 MIS18BP1Q6P0N0 1132 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 C1orf228Q6PIY5 440 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 CRELD2Q6UXH1 353 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 CCDC33Q8N5R6 958 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TBC1D19Q8N5T2 526 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 EFHBQ8N7U6 833 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SUN5Q8TC36 379 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 RORBQ92753 470 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 HEXIM2Q96MH2 286 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ECSITQ9BQ95 431 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TRIM62Q9BVG3 475 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 MMADHCQ9H3L0 296 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 EMC3Q9P0I2 261 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 IGSF9BQ9UPX0 1349 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SLCO1B7G3V0H7 640 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 HLA-DRAP01903 254 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 NR3C2P08235 984 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TARSP26639 723 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 NUDT2P50583 147 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TRAF3Q13114 568 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 PKN3Q6P5Z2 889 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 CLVS1Q8IUQ0 354 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ANKMY2Q8IV38 441 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 C4orf33Q8N1A6 199 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 RDM1Q8NG50 284 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 MAGEB18Q96M61 343 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 PAGR1Q9BTK6 254 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 HDHD2Q9H0R4 259 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 DNAJC18Q9H819 358 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 AS3MTQ9HBK9 375 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 RXFP1Q9HBX9 757 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ALG13Q9NP73 1137 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 AVENQ9NQS1 362 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 METTL5Q9NRN9 209 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ATXN10Q9UBB4 475 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ZC3H7BQ9UGR2 993 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 PCSK1NQ9UHG2 260 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TMCO1Q9UM00 188 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 WBP11Q9Y2W2 641 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SH3GLB1Q9Y371 365 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TPRKBQ9Y3C4 175 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SNX13Q9Y5W8 968 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 LOC100653049A0A140TA62 436 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 VWA5AO00534 786 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 RAD51BO15315 384 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 RIPK2O43353 540 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 KRT34O76011 436 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 TAF1P21675 1872 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 CAPZA2P47755 286 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 LRRC74AQ0VAA2 488 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 STXBP2Q15833 593 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 PREPLQ4J6C6 727 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SPOUT1Q5T280 376 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 C11orf63Q6NUN7 778 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ARID3BQ8IVW6 561 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ARL10Q8N8L6 244 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 ASAP3Q8TDY4 903 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 EPS8L1Q8TE68 723 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 NSUN6Q8TEA1 469 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 OSCP1Q8WVF1 389 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 S100ZQ8WXG8 99 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 KAT2BQ92831 832 aa6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 EFHD2Q96C19 240 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 MARCOQ9UEW3 520 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-208ENST00000475997 SPDYE5A6NIY4 337 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 UBXN8O00124 270 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 LSM1O15116 133 aaKnown RBP6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 ALOX12P18054 663 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 MAGEA4P43358 317 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 BCAP31P51572 246 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 PLIN5Q00G26 463 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 PTK7Q13308 1070 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 CCDC153Q494R4 210 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 SPDYE7PQ495Y7 208 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF554Q86TJ5 538 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 WDR36Q8NI36 951 aaKnown RBP6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 AGR3Q8TD06 166 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 TRPC4APQ8TEL6 797 aa6.28□□□□□ -1.4
HNRNPU-208ENST00000475997 UBASH3BQ8TF42 649 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms