RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 SDE2Q6IQ49 451 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 KIAA1211LQ6NV74 962 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 TOGARAM2Q6ZUX3 1019 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 IPO4Q8TEX9 1081 aaKnown RBP26.27■■□□□ 1.8
TMEM54-205ENST00000475208 TWNKQ96RR1 684 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 GTPBP2Q9BX10 602 aaKnown RBP26.27■■□□□ 1.8
TMEM54-205ENST00000475208 CD248Q9HCU0 757 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 RALYQ9UKM9 306 aaKnown RBP26.27■■□□□ 1.8
TMEM54-205ENST00000475208 IGF2RP11717 2491 aa26.27■■□□□ 1.8
TMEM54-205ENST00000475208 CEP192Q8TEP8 1941 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 PRRT4C9JH25 899 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 HHLA1C9JL84 531 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 MDM4O15151 490 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 TRIM21P19474 475 aaKnown RBP26.26■■□□□ 1.79
TMEM54-205ENST00000475208 ACO1P21399 889 aaKnown RBP26.26■■□□□ 1.79
TMEM54-205ENST00000475208 GFPT1Q06210 699 aaPredicted RBP26.26■■□□□ 1.79
TMEM54-205ENST00000475208 C1orf220Q5T0J3 134 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 PIP4P1Q86T03 277 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 KDF1Q8NAX2 398 aaPredicted RBP26.26■■□□□ 1.79
TMEM54-205ENST00000475208 HNRNPABQ99729 332 aaKnown RBP26.26■■□□□ 1.79
TMEM54-205ENST00000475208 NMUR1Q9HB89 426 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 CAPN10Q9HC96 672 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 CYP8B1Q9UNU6 501 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 FRMD4BQ9Y2L6 1034 aa26.26■■□□□ 1.79
TMEM54-205ENST00000475208 IKBKBO14920 756 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 ZNF217O75362 1048 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 SERPINF2P08697 491 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 INCA1Q0VD86 236 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 SEMA3BQ13214 749 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 ATL3Q6DD88 541 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 RABEPKQ7Z6M1 372 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 HDDC3Q8N4P3 179 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 SNX21Q969T3 373 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 CYFIP2Q96F07 1278 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 GABRG3Q99928 467 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.25■■□□□ 1.79
TMEM54-205ENST00000475208 NUDT5Q9UKK9 219 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 CFAP45Q9UL16 551 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 PCDHA5Q9Y5H7 936 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 RAD54BQ9Y620 910 aa26.25■■□□□ 1.79
TMEM54-205ENST00000475208 ASPMQ8IZT6 3477 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 SPAARA0A1B0GVQ0 90 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 A0A1W2PQH9 124 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 UPK3BL1B0FP48 263 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 UPK3BL2E5RIL1 263 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 RARGP13631 454 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 PDIA4P13667 645 aaKnown RBP26.24■■□□□ 1.79
TMEM54-205ENST00000475208 DGKGP49619 791 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 KLHDC10Q6PID8 442 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 SLC41A1Q8IVJ1 513 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 GATA6Q92908 595 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 BHMTQ93088 406 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 HSPA12BQ96MM6 686 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 NT5C1AQ9BXI3 368 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 PNPLA8Q9NP80 782 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 CACNA2D2Q9NY47 1150 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 DNMT3LQ9UJW3 386 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 PCDH15Q96QU1 1955 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 ADAMTS9Q9P2N4 1935 aa26.24■■□□□ 1.79
TMEM54-205ENST00000475208 HYAL3O43820 417 aaPredicted RBP26.23■■□□□ 1.79
TMEM54-205ENST00000475208 VAMP7P51809 220 aa26.23■■□□□ 1.79
TMEM54-205ENST00000475208 DNM1Q05193 864 aaKnown RBP26.23■■□□□ 1.79
TMEM54-205ENST00000475208 C10orf120Q5SQS8 335 aa26.23■■□□□ 1.79
TMEM54-205ENST00000475208 Q6ZNB5 142 aa26.23■■□□□ 1.79
TMEM54-205ENST00000475208 TRIML1Q8N9V2 468 aa26.23■■□□□ 1.79
TMEM54-205ENST00000475208 IMPG2Q9BZV3 1241 aa26.23■■□□□ 1.79
TMEM54-205ENST00000475208 SLC6A17Q9H1V8 727 aa26.23■■□□□ 1.79
TMEM54-205ENST00000475208 APOBEC3GQ9HC16 384 aaKnown RBP26.23■■□□□ 1.79
TMEM54-205ENST00000475208 RCOR1Q9UKL0 485 aa26.23■■□□□ 1.79
TMEM54-205ENST00000475208 CACNA1EQ15878 2313 aa26.23■■□□□ 1.79
TMEM54-205ENST00000475208 TMEM8BA6NDV4 472 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 CALUO43852 315 aaPredicted RBP26.22■■□□□ 1.79
TMEM54-205ENST00000475208 OPHN1O60890 802 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 CISD3P0C7P0 127 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 PLA2G4AP47712 749 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 SIM1P81133 766 aaPredicted RBP26.22■■□□□ 1.79
TMEM54-205ENST00000475208 PKP1Q13835 747 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 MINDY1Q8N5J2 469 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 CYP3A43Q9HB55 503 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 CD93Q9NPY3 652 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 PLK2Q9NYY3 685 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 NAGPAQ9UK23 515 aa26.22■■□□□ 1.79
TMEM54-205ENST00000475208 AKAP13Q12802 2813 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 ZZEF1O43149 2961 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 STC2O76061 302 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 HSP90AA1P07900 732 aaKnown RBP26.21■■□□□ 1.79
TMEM54-205ENST00000475208 TRIM49P0CI25 452 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 TRIM49CP0CI26 452 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 PFKFB1P16118 471 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 CD58P19256 250 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 KIF11P52732 1056 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 KIAA1324Q6UXG2 1013 aaKnown RBP26.21■■□□□ 1.79
TMEM54-205ENST00000475208 SCD5Q86SK9 330 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 OR2I1PQ8NGU4 316 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 TAS1R2Q8TE23 839 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 MRGPRX1Q96LB2 322 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 NIF3L1Q9GZT8 377 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 TRAF3IP3Q9Y228 551 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 NEUROG3Q9Y4Z2 214 aa26.21■■□□□ 1.79
TMEM54-205ENST00000475208 FAM208BQ5VWN6 2430 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms