RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PLA2G6O60733 806 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 MBPP02686 304 aaPredicted RBP6.41□□□□□ -1.38
SSB-209ENST00000470621 DRD1P21728 446 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 ADRA1DP25100 572 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 CD38P28907 300 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 GPC5P78333 572 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 MAPKAPK3Q16644 382 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 P3H2Q8IVL5 708 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 PNPLA1Q8N8W4 532 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 ABHD5Q8WTS1 349 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 GRAMD1AQ96CP6 724 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 EDC3Q96F86 508 aaKnown RBP6.41□□□□□ -1.38
SSB-209ENST00000470621 EIF2AQ9BY44 585 aaKnown RBP6.41□□□□□ -1.38
SSB-209ENST00000470621 ZCWPW1Q9H0M4 648 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 VPS45Q9NRW7 570 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 IGSF9Q9P2J2 1179 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 SLC39A10Q9ULF5 831 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 PCSK5Q92824 1860 aa6.41□□□□□ -1.38
SSB-209ENST00000470621 ZSCAN9O15535 394 aaPredicted RBP6.4□□□□□ -1.38
SSB-209ENST00000470621 MT-CO3P00414 261 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 IDEP14735 1019 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 ATF7P17544 494 aaPredicted RBP6.4□□□□□ -1.38
SSB-209ENST00000470621 TUBA4AP68366 448 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 ATP1A4Q13733 1029 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 FAM187BQ17R55 369 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 TMEM196Q5HYL7 178 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 COLEC12Q5KU26 742 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 TOGARAM2Q6ZUX3 1019 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 PTF1AQ7RTS3 328 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.4□□□□□ -1.38
SSB-209ENST00000470621 KAZALD1Q96I82 304 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 MPHOSPH6Q99547 160 aaKnown RBP6.4□□□□□ -1.38
SSB-209ENST00000470621 USP29Q9HBJ7 922 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 FSCN3Q9NQT6 498 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 PCDHB2Q9Y5E7 798 aa6.4□□□□□ -1.38
SSB-209ENST00000470621 PRRT4C9JH25 899 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 POC1B-GALNT4F8VUJ3 575 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 PCDH17O14917 1159 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 DHHO43323 396 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 LATS1O95835 1130 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 HTR3AP46098 478 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 TXNL4AP83876 142 aaKnown RBP6.39□□□□□ -1.39
SSB-209ENST00000470621 HDAC1Q13547 482 aaPredicted RBP6.39□□□□□ -1.39
SSB-209ENST00000470621 DENND2CQ68D51 928 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 GALNT4Q8N4A0 578 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 VPS50Q96JG6 964 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 ASB2Q96Q27 587 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 SH2D3AQ9BRG2 576 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 TTLL2Q9BWV7 592 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 NECTIN3Q9NQS3 549 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 TFCP2L1Q9NZI6 479 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 TNFRSF18Q9Y5U5 241 aa6.39□□□□□ -1.39
SSB-209ENST00000470621 AQP12BA6NM10 295 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 PIP5K1BO14986 540 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 FYB1O15117 783 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 GCATO75600 419 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 VIPP01282 170 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 SRGAP2BP0DMP2 458 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 CYP2D6P10635 497 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 CYP2A6P11509 494 aaPredicted RBP6.38□□□□□ -1.39
SSB-209ENST00000470621 MPGP29372 298 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 GALNSP34059 522 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 RAE1P78406 368 aaKnown RBP6.38□□□□□ -1.39
SSB-209ENST00000470621 CFHR3Q02985 330 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 NSUN2Q08J23 767 aaKnown RBP eCLIP6.38□□□□□ -1.39
SSB-209ENST00000470621 DNASE1L3Q13609 305 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 KCNJ12Q14500 433 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 MFSD13AQ14CX5 517 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 LARS2Q15031 903 aaKnown RBP6.38□□□□□ -1.39
SSB-209ENST00000470621 FAM90A2PQ658T7 463 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 DCDC5Q6ZRR9 648 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 KRT73Q86Y46 540 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 SYTL1Q8IYJ3 562 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 C12orf76Q8N812 135 aaPredicted RBP6.38□□□□□ -1.39
SSB-209ENST00000470621 ACRBPQ8NEB7 543 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 MUL1Q969V5 352 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 EPS8L2Q9H6S3 715 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 ARFGAP3Q9NP61 516 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 PDGFCQ9NRA1 345 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 TM7SF3Q9NS93 570 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 VPS4AQ9UN37 437 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 DAAM1Q9Y4D1 1078 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 DTNAQ9Y4J8 743 aa6.38□□□□□ -1.39
SSB-209ENST00000470621 ABHD14A-ACY1A0A1B0GW23 586 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 J3KTA2 159 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 ADAMTS3O15072 1205 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 ALADP13716 330 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 RHBDL3P58872 404 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 MRPS21P82921 87 aaKnown RBP6.37□□□□□ -1.39
SSB-209ENST00000470621 BTKQ06187 659 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 SLC10A2Q12908 348 aaPredicted RBP6.37□□□□□ -1.39
SSB-209ENST00000470621 FOXF2Q12947 444 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 GRM1Q13255 1194 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 BFSP2Q13515 415 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 STARD3Q14849 445 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 BRD3Q15059 726 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 CCDC142Q17RM4 750 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 CEP78Q5JTW2 689 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 TMEM65Q6PI78 240 aa6.37□□□□□ -1.39
SSB-209ENST00000470621 PIK3AP1Q6ZUJ8 805 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms