RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 ADAMTS9Q9P2N4 1935 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 TRAV19A0A0A6YYK7 116 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 MED19A0JLT2 244 aaPredicted RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 PRR5-ARHGAP8B1AHC4 643 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 KHNYNO15037 678 aaKnown RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 PRMT3O60678 531 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 LRP3O75074 770 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 TACC1O75410 805 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 CST3P01034 146 aaPredicted RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 CKMP06732 381 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 RETP07949 1114 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 PDGFRBP09619 1106 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 USP17L7P0C7H9 530 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 ZSCAN22P10073 491 aaPredicted RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 TCF3P15923 654 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 TNNI1P19237 187 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 BDNFP23560 247 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 GJA4P35212 333 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 CYP2J2P51589 502 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 ARHGAP8P85298 464 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 LMNB2Q03252 620 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 GRSF1Q12849 480 aaKnown RBP eCLIP7.51□□□□□ -1.21
SND1-205ENST00000467238 SRSF5Q13243 272 aaKnown RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 CUL4BQ13620 913 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 PKP1Q13835 747 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 SIM2Q14190 667 aaPredicted RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 PSMD6Q15008 389 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 PDGFRLQ15198 375 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 MAPRE1Q15691 268 aaKnown RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 RESP18Q5W5W9 173 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 HEATR6Q6AI08 1181 aaKnown RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 FSTL4Q6MZW2 842 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 CC2D1AQ6P1N0 951 aaPredicted RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 PRR23BQ6ZRT6 265 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 DENND5BQ6ZUT9 1274 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 HS2ST1Q7LGA3 356 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 HSCBQ8IWL3 235 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 NELFCDQ8IXH7 590 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 C12orf56Q8IXR9 622 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 FSIP1Q8NA03 581 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 MYCBPAPQ8TBZ2 947 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 OSCP1Q8WVF1 389 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 CCDC127Q96BQ5 260 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 PCED1BQ96HM7 432 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 SPATA17Q96L03 361 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 CEP295NLQ96MC4 621 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 FNBP1Q96RU3 617 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 CYP2S1Q96SQ9 504 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 MMS19Q96T76 1030 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 MRPL45Q9BRJ2 306 aaKnown RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 TSPAN10Q9H1Z9 355 aaPredicted RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 ECT2Q9H8V3 914 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 TRPC7Q9HCX4 862 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 CGNQ9P2M7 1197 aaKnown RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 MAGEC2Q9UBF1 373 aaPredicted RBP7.51□□□□□ -1.21
SND1-205ENST00000467238 STARD13Q9Y3M8 1113 aa7.51□□□□□ -1.21
SND1-205ENST00000467238 PVALEFA0A1B0GWK0 134 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 C2orf78A6NCI8 922 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 F8VP50 259 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 M0R082 166 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 KLRC4O43908 158 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 EGFP01133 1207 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 FAM163BP0C2L3 166 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 PFKLP17858 780 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 DRD1P21728 446 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 SDHBP21912 280 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ANXA13P27216 316 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 GNL1P36915 607 aaPredicted RBP7.5□□□□□ -1.21
SND1-205ENST00000467238 GRIK1P39086 918 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 AFMP43652 599 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ME1P48163 572 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 GALK1P51570 392 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ATXN1P54253 815 aaKnown RBP7.5□□□□□ -1.21
SND1-205ENST00000467238 ZXDBP98169 803 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 AMPD2Q01433 879 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 CYP27A1Q02318 531 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 DNM1Q05193 864 aaKnown RBP7.5□□□□□ -1.21
SND1-205ENST00000467238 SPEM2Q0P670 501 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 KCNB1Q14721 858 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 KNOP1Q1ED39 458 aaKnown RBP7.5□□□□□ -1.21
SND1-205ENST00000467238 WDR72Q3MJ13 1102 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ARSJQ5FYB0 599 aaPredicted RBP7.5□□□□□ -1.21
SND1-205ENST00000467238 MDH1BQ5I0G3 518 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 NAIF1Q69YI7 327 aaPredicted RBP7.5□□□□□ -1.21
SND1-205ENST00000467238 ATL3Q6DD88 541 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 WDR5BQ86VZ2 330 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 SLC9A9Q8IVB4 645 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 CPA6Q8N4T0 437 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ARL14EPQ8N8R7 260 aaPredicted RBP7.5□□□□□ -1.21
SND1-205ENST00000467238 KIAA0895Q8NCT3 520 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 OR6B3Q8NGW1 331 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ZNF417Q8TAU3 575 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 PLEKHO2Q8TD55 490 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 SH3RF2Q8TEC5 729 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ZDHHC1Q8WTX9 485 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ATP2A3Q93084 1043 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 ZNF587Q96SQ5 575 aaPredicted RBP7.5□□□□□ -1.21
SND1-205ENST00000467238 TTLL2Q9BWV7 592 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 KRTAP4-2Q9BYR5 136 aa7.5□□□□□ -1.21
SND1-205ENST00000467238 XYLT2Q9H1B5 865 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms