RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
RAB11FIP3-207ENST00000461009 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
RAB11FIP3-207ENST00000461009 GMIPQ9P107 970 aa13.91□□□□□ -0.18
RAB11FIP3-207ENST00000461009 USP18Q9UMW8 372 aa13.91□□□□□ -0.18
RAB11FIP3-207ENST00000461009 FHOD1Q9Y613 1164 aa13.91□□□□□ -0.18
RAB11FIP3-207ENST00000461009 CPQQ9Y646 472 aa13.91□□□□□ -0.18
RAB11FIP3-207ENST00000461009 USP3Q9Y6I4 520 aa13.91□□□□□ -0.18
RAB11FIP3-207ENST00000461009 CCDC163A0A0D9SF12 145 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 PRR5-ARHGAP8B1AHC4 643 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 K7ESF4 209 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 RNF40O75150 1001 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 ADH1CP00326 375 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 OAS1P00973 400 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 EGFP01133 1207 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 RALAP11233 206 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 PLA2G4AP47712 749 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TUBP50607 506 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TKTL1P51854 596 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SNX16P57768 344 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 POLR2FP61218 127 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 ARHGAP8P85298 464 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 LMNB2Q03252 620 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 GOLGA8FQ08AF8 430 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 GOLGA8DPQ0D2H9 430 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 PKDCCQ504Y2 493 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 RAB41Q5JT25 222 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 APTXQ7Z2E3 356 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 GPRIN1Q7Z2K8 1008 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 WDR5BQ86VZ2 330 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SIX6OS1Q8N1H7 587 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SLC35F5Q8WV83 523 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 HSFY1Q96LI6 401 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 CDK5RAP1Q96SZ6 601 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 NAA15Q9BXJ9 866 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 RNF38Q9H0F5 515 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 GANQ9H2C0 597 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 LINC00597Q9H2U6 94 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SMPD4Q9NXE4 827 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 CFAP97Q9P2B7 532 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SIK3Q9Y2K2 1263 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SH3BP1Q9Y3L3 701 aa13.9□□□□□ -0.18
RAB11FIP3-207ENST00000461009 KIF26AQ9ULI4 1882 aaPredicted RBP13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 MYO16Q9Y6X6 1858 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 VPS13AQ96RL7 3174 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 E2F8A0AVK6 867 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 FOXD2O60548 495 aaPredicted RBP13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 LRP3O75074 770 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 FBXO21O94952 628 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 OLFM2O95897 454 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ZBED1O96006 694 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CALCAP01258 141 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 RETP07949 1114 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ZDHHC11BP0C7U3 371 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CLCN1P35523 988 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ACADSBP45954 432 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 FANCCQ00597 558 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 PUM1Q14671 1186 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 PM20D1Q6GTS8 502 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 NUDT18Q6ZVK8 323 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 RIN3Q8TB24 985 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 OTUB2Q96DC9 234 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CHFRQ96EP1 664 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ZSWIM1Q9BR11 485 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CNGB3Q9NQW8 809 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CLIC5Q9NZA1 410 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 NAGPAQ9UK23 515 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 AJAP1Q9UKB5 411 aaPredicted RBP13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 PCDHGC3Q9UN70 934 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CEP83Q9Y592 693 aa13.89□□□□□ -0.19
RAB11FIP3-207ENST00000461009 A0A1B0GTH6 734 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 A0A1W2PQH9 124 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 HRO43593 1189 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 TLR5O60602 858 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CCDC172P0C7W6 258 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 RARGP13631 454 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ATP5C1P36542 298 aaKnown RBP13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 STAT1P42224 750 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 GPD2P43304 727 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 KLK7P49862 253 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 UBASH3AP57075 661 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 LPAL2Q16609 132 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 PMF1Q6P1K2 205 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 SYT13Q7L8C5 426 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ADGRG2Q8IZP9 1017 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 SCML4Q8N228 414 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 RPLP0P6Q8NHW5 317 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 STK32AQ8WU08 396 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 NOX5Q96PH1 765 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 LHX5Q9H2C1 402 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 NLRC4Q9NPP4 1024 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 CYLDQ9NQC7 956 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ST7Q9NRC1 585 aa13.88□□□□□ -0.19
RAB11FIP3-207ENST00000461009 A0A1W2PQC6 194 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms