RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ODC1P11926 461 aa16.9■□□□□ 0.3
LSS-205ENST00000457828 IKBKEQ14164 716 aa16.9■□□□□ 0.3
LSS-205ENST00000457828 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
LSS-205ENST00000457828 DHX35Q9H5Z1 703 aaKnown RBP16.9■□□□□ 0.3
LSS-205ENST00000457828 RSAD1Q9HA92 442 aa16.9■□□□□ 0.3
LSS-205ENST00000457828 IRAK4Q9NWZ3 460 aa16.9■□□□□ 0.3
LSS-205ENST00000457828 XIRP1Q702N8 1843 aaKnown RBP16.9■□□□□ 0.3
LSS-205ENST00000457828 MAPTP10636 758 aaKnown RBP16.89■□□□□ 0.3
LSS-205ENST00000457828 MRPS6P82932 125 aaKnown RBP16.89■□□□□ 0.3
LSS-205ENST00000457828 MAMLD1Q13495 774 aa16.89■□□□□ 0.3
LSS-205ENST00000457828 CAPSQ13938 189 aa16.89■□□□□ 0.3
LSS-205ENST00000457828 STILQ15468 1287 aa16.89■□□□□ 0.3
LSS-205ENST00000457828 SLC45A4Q5BKX6 768 aa16.89■□□□□ 0.3
LSS-205ENST00000457828 ACOT1Q86TX2 421 aa16.89■□□□□ 0.3
LSS-205ENST00000457828 SCUBE1Q8IWY4 988 aa16.89■□□□□ 0.3
LSS-205ENST00000457828 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.89■□□□□ 0.3
LSS-205ENST00000457828 MYO5AQ9Y4I1 1855 aaKnown RBP16.89■□□□□ 0.3
LSS-205ENST00000457828 ACTL7BQ9Y614 415 aa16.89■□□□□ 0.3
LSS-205ENST00000457828 CD52P31358 61 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 RAB27AP51159 221 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 SLC12A2P55011 1212 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 SLC34A1Q06495 639 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 EFTUD2Q15029 972 aaKnown RBP eCLIP16.89■□□□□ 0.297e-7■■■■□ 22
LSS-205ENST00000457828 HSP90AA5PQ58FG0 334 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 WRAP73Q9P2S5 460 aaPredicted RBP16.89■□□□□ 0.29
LSS-205ENST00000457828 RECQL4O94761 1208 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 SH3BGRP55822 239 aaPredicted RBP16.89■□□□□ 0.29
LSS-205ENST00000457828 ART3Q13508 389 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 KATNAL2Q8IYT4 538 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 ICA1LQ8NDH6 482 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 DMAC2Q9NW81 257 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 TLL2Q9Y6L7 1015 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 KIF3CO14782 793 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 LIASO43766 372 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 AP1G2O75843 785 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 GTF2BQ00403 316 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 MCL1Q07820 350 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 FAAP100Q0VG06 881 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 DBN1Q16643 649 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 FAM228AQ86W67 206 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 MAP4K3Q8IVH8 894 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 GABPB2Q8TAK5 448 aaPredicted RBP16.89■□□□□ 0.29
LSS-205ENST00000457828 NUF2Q9BZD4 464 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 CREBZFQ9NS37 354 aa16.89■□□□□ 0.29
LSS-205ENST00000457828 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.29
LSS-205ENST00000457828 FAF1Q9UNN5 650 aaPredicted RBP16.89■□□□□ 0.29
LSS-205ENST00000457828 CHD4Q14839 1912 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 IGLV3-22A0A075B6J6 115 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 HMBSP08397 361 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 SLC10A3P09131 477 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 POU5F1Q01860 360 aaKnown RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 CEP120Q8N960 986 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 DDX50Q9BQ39 737 aaKnown RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 ARHGEF3Q9NR81 526 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 CORO1CQ9ULV4 474 aaPredicted RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 CHKBQ9Y259 395 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 ZNF536O15090 1300 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 TREHO43280 583 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 SLC4A1P02730 911 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 PRMT2P55345 433 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 WDR4P57081 412 aaKnown RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 DYNC1I2Q13409 638 aaKnown RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 TMED1Q13445 227 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 FBXO47Q5MNV8 452 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 DCLK2Q8N568 766 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 FNDC3AQ9Y2H6 1198 aaKnown RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 SLC45A1Q9Y2W3 748 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 APOEP02649 317 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 SKIV2L2P42285 1042 aaKnown RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 TTC39BQ5VTQ0 682 aaPredicted RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 HEATR6Q6AI08 1181 aaKnown RBP16.88■□□□□ 0.29
LSS-205ENST00000457828 SPON2Q9BUD6 331 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 C2CD2Q9Y426 696 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 ADGRA3Q8IWK6 1321 aa16.88■□□□□ 0.29
LSS-205ENST00000457828 FAM237BA0A1B0GVD1 139 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 C2orf71A6NGG8 1288 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 SNUPNO95149 360 aaKnown RBP16.87■□□□□ 0.29
LSS-205ENST00000457828 URODP06132 367 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 ALDH1A3P47895 512 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 DSG1Q02413 1049 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 CTXN3Q4LDR2 81 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 TMEM161BQ8NDZ6 487 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 LRMDAQ9H2I8 198 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 DENND2DQ9H6A0 471 aaPredicted RBP16.87■□□□□ 0.29
LSS-205ENST00000457828 ENTPD7Q9NQZ7 604 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 ST3GAL5Q9UNP4 418 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.87■□□□□ 0.29
LSS-205ENST00000457828 NEMP1O14524 444 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 CASQ2O14958 399 aaPredicted RBP16.87■□□□□ 0.29
LSS-205ENST00000457828 TM9SF1O15321 606 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 AXLP30530 894 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
LSS-205ENST00000457828 ISLR2Q6UXK2 745 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 ZCCHC23Q6ZST2 131 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 POU5F2Q8N7G0 328 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 NPLOC4Q8TAT6 608 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 ANKRD27Q96NW4 1050 aa16.87■□□□□ 0.29
LSS-205ENST00000457828 HIPK3Q9H422 1215 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms