RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MYH10P35580 1976 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 A0A1W2PQH9 124 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 SYCE3A1L190 88 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 RNF225M0QZC1 329 aaPredicted RBP15.31■□□□□ 0.04
USP39-206ENST00000448971 LEFTY2O00292 366 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 TULP2O00295 520 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 THAP12O43422 761 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 ZDHHC11BP0C7U3 371 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 CDK11BP21127 795 aaKnown RBP15.31■□□□□ 0.04
USP39-206ENST00000448971 GNA15P30679 374 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 CTHP32929 405 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 PLA2G4AP47712 749 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 TKTL1P51854 596 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 SLC7A9P82251 487 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 ADIGQ0VDE8 80 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 RAPGEF1Q13905 1077 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 PDGFRLQ15198 375 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 LCLAT1Q6UWP7 414 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 CCDC186Q7Z3E2 898 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 FAM160A2Q8N612 972 aaPredicted RBP15.31■□□□□ 0.04
USP39-206ENST00000448971 RNF38Q9H0F5 515 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 EBF3Q9H4W6 596 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 SIX2Q9NPC8 291 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 GKN1Q9NS71 199 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 DUS2Q9NX74 493 aaKnown RBP15.31■□□□□ 0.04
USP39-206ENST00000448971 DNAJC12Q9UKB3 198 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
USP39-206ENST00000448971 ZNF638Q14966 1978 aaKnown RBP15.31■□□□□ 0.04
USP39-206ENST00000448971 SCAMP3O14828 347 aaKnown RBP15.3■□□□□ 0.04
USP39-206ENST00000448971 TM4SF5O14894 197 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 MED7O43513 233 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
USP39-206ENST00000448971 IRF1P10914 325 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 RALAP11233 206 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 TCF3P15923 654 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 RGS7P49802 495 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 ITPRIPL2Q3MIP1 535 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 SNX30Q5VWJ9 437 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 HEATR6Q6AI08 1181 aaKnown RBP15.3■□□□□ 0.04
USP39-206ENST00000448971 TADA2BQ86TJ2 420 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 ARHGAP18Q8N392 663 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 SYNPOQ8N3V7 929 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 CPA6Q8N4T0 437 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 OSCP1Q8WVF1 389 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 SHC3Q92529 594 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 ATP2A3Q93084 1043 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 ZSWIM1Q9BR11 485 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 ULBP1Q9BZM6 244 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 UBXN6Q9BZV1 441 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 CFAP97Q9P2B7 532 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 AJAP1Q9UKB5 411 aaPredicted RBP15.3■□□□□ 0.04
USP39-206ENST00000448971 CNTN6Q9UQ52 1028 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 SH3BP1Q9Y3L3 701 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 FRYQ5TBA9 3013 aa15.3■□□□□ 0.04
USP39-206ENST00000448971 FOXD2O60548 495 aaPredicted RBP15.29■□□□□ 0.04
USP39-206ENST00000448971 RARGP13631 454 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 LCP1P13796 627 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 ARSAP15289 507 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 PGFP49763 221 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 COPB1P53618 953 aaKnown RBP15.29■□□□□ 0.04
USP39-206ENST00000448971 GOLGA8FQ08AF8 430 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 GOLGA8DPQ0D2H9 430 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 RUNX3Q13761 415 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 PON2Q15165 354 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 CNGA2Q16280 664 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 ST3GAL2Q16842 350 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 RAB41Q5JT25 222 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 C10orf120Q5SQS8 335 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 RSRC2Q7L4I2 434 aaKnown RBP15.29■□□□□ 0.04
USP39-206ENST00000448971 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.29■□□□□ 0.04
USP39-206ENST00000448971 WDR5BQ86VZ2 330 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 PCMTD1Q96MG8 357 aaPredicted RBP15.29■□□□□ 0.04
USP39-206ENST00000448971 FAM83CQ9BQN1 747 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 BPIFA3Q9BQP9 254 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 NMUR1Q9HB89 426 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 CYLDQ9NQC7 956 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 HPS4Q9NQG7 708 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 OSER1Q9NX31 292 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 RASAL2Q9UJF2 1139 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 NUDT5Q9UKK9 219 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 USP3Q9Y6I4 520 aa15.29■□□□□ 0.04
USP39-206ENST00000448971 SMTNL1A8MU46 457 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 BECN2A8MW95 431 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 PIK3R2O00459 728 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 MDM4O15151 490 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 NFATC1O95644 943 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 ZBED1O96006 694 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 PNMA6AP0CW24 399 aaPredicted RBP15.28■□□□□ 0.04
USP39-206ENST00000448971 ATP5C1P36542 298 aaKnown RBP15.28■□□□□ 0.04
USP39-206ENST00000448971 ZNF165P49910 485 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 YWHAGP61981 247 aaKnown RBP eCLIP15.28■□□□□ 0.04
USP39-206ENST00000448971 ZXDBP98169 803 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 KCNMA1Q12791 1236 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 NCAPHQ15003 741 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 PKDCCQ504Y2 493 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 CDK5RAP1Q96SZ6 601 aaKnown RBP15.28■□□□□ 0.04
USP39-206ENST00000448971 ACP6Q9NPH0 428 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 ST7Q9NRC1 585 aa15.28■□□□□ 0.04
USP39-206ENST00000448971 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms