RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 FAM25CB3EWG5 89 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 FAM25GB3EWG6 89 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 TRIM24O15164 1050 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 GRIK3Q13003 919 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 SPIDRQ14159 915 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 USP41Q3LFD5 358 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 FUT11Q495W5 492 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 CBWD3Q5JTY5 395 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 CBWD5Q5RIA9 395 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 FBXL19Q6PCT2 694 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 RAD51BO15315 384 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 PTPN21Q16825 1174 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 PAGE2BQ5JRK9 111 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 TTC33Q6PID6 262 aaPredicted RBP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 RPTNQ6XPR3 784 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 DSELQ8IZU8 1212 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 INTS7Q9NVH2 962 aaKnown RBP11.52□□□□□ -0.57
SCN4A-201ENST00000435607 N6AMT1Q9Y5N5 214 aa11.52□□□□□ -0.57
SCN4A-201ENST00000435607 MSCO60682 206 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 MYL12AP19105 171 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 ACADLP28330 430 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 SOX11P35716 441 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 IKBKEQ14164 716 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 CYP4X1Q8N118 509 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 AP4S1Q9Y587 144 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 MORC2Q9Y6X9 1032 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 RFX7Q2KHR2 1363 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 IGF2BP3O00425 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 CST8O60676 142 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 AVILO75366 819 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 RBP3P10745 1247 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 TCN1P20061 433 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 CYP2A13Q16696 494 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 NDUFA5Q16718 116 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 ARMC4Q5T2S8 1044 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 SAMD3Q8N6K7 520 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 EPB41L4BQ9H329 900 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 PDS5AQ29RF7 1337 aaKnown RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 AP3D1O14617 1153 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 HTR1BP28222 390 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 ATP6AP1LQ52LC2 224 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 SLCO1B7G3V0H7 640 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 PEX5P50542 639 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 C9orf131Q5VYM1 1079 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 PRR5LQ6MZQ0 368 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 NLRP14Q86W24 1093 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 RERGQ96A58 199 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 NCF1BA6NI72 391 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 NCF1CA8MVU1 366 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 IFNA16P05015 189 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 NCF1P14598 390 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 ZNF7P17097 686 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 GGCXP38435 758 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 CBFBQ13951 182 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 C12orf60Q5U649 245 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 PRPF39Q86UA1 669 aaKnown RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 CBWD2Q8IUF1 395 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 GALNT4Q8N4A0 578 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 DPY30Q9C005 99 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 B2RBV5 119 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 SERPINF2P08697 491 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 VDRP11473 427 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 CES1P23141 567 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 HOXC12P31275 282 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 ITGA1P56199 1179 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 TSNQ15631 228 aaKnown RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 FOXR1Q6PIV2 292 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 SH3BP5LQ7L8J4 393 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 E2F7Q96AV8 911 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 PRMT1Q99873 361 aaKnown RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 TRIM10Q9UDY6 481 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 MARCOQ9UEW3 520 aaPredicted RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 TRIM17Q9Y577 477 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 RPS6KL1Q9Y6S9 549 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 ZNF682O95780 498 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 WARSP23381 471 aaKnown RBP11.51□□□□□ -0.57
SCN4A-201ENST00000435607 GPR15P49685 360 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 IZUMO1Q8IYV9 350 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 CXorf40AQ8TE69 158 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 LRRC40Q9H9A6 602 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 PYCARDQ9ULZ3 195 aa11.51□□□□□ -0.57
SCN4A-201ENST00000435607 MSH4O15457 936 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 SKAP2O75563 359 aaPredicted RBP11.5□□□□□ -0.57
SCN4A-201ENST00000435607 ENDOD1O94919 500 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 TPBGLP0DKB5 382 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 FCGR1AP12314 374 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 LPIN1Q14693 890 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 LAYNQ6UX15 382 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 PEX5LQ8IYB4 626 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 ATG16L2Q8NAA4 619 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 UBE2E3Q969T4 207 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 NACC2Q96BF6 587 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 MAPRE3Q9UPY8 281 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 ZBTB39O15060 712 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 GLRA3O75311 464 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 ANXA5P08758 320 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 CXCR2P25025 360 aa11.5□□□□□ -0.57
SCN4A-201ENST00000435607 CCR1P32246 355 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms