RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 MARCH2Q9P0N8 246 aa10.29□□□□□ -0.76
HDAC6-207ENST00000430858 HELZP42694 1942 aaKnown RBP10.29□□□□□ -0.76
HDAC6-207ENST00000430858 CACNA1IQ9P0X4 2223 aa10.29□□□□□ -0.76
HDAC6-207ENST00000430858 MYH10P35580 1976 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 YJEFN3A6XGL0 299 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 BECN2A8MW95 431 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 E7ENQ6 273 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 K7ESF4 209 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 PES1O00541 588 aaKnown RBP10.28□□□□□ -0.76
HDAC6-207ENST00000430858 THAP12O43422 761 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 GABBR2O75899 941 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 LETM1O95202 739 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-207ENST00000430858 CALCAP01258 141 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 APODP05090 189 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 TPM2P07951 284 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 USP8P40818 1118 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 GPD2P43304 727 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 RPL34P49207 117 aaKnown RBP10.28□□□□□ -0.76
HDAC6-207ENST00000430858 RGS7P49802 495 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 APBA1Q02410 837 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 PTK2Q05397 1052 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 STX1AQ16623 288 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 ANO4Q32M45 955 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 C12orf40Q86WS4 652 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 TMEM25Q86YD3 366 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 STK32AQ8WU08 396 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 ZNF606Q8WXB4 792 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 NDRG1Q92597 394 aaKnown RBP10.28□□□□□ -0.76
HDAC6-207ENST00000430858 EZH1Q92800 747 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-207ENST00000430858 GOLGA1Q92805 767 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 ACDQ96AP0 544 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 SIX2Q9NPC8 291 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 WDR35Q9P2L0 1181 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 DNAJC12Q9UKB3 198 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 SLC8A2Q9UPR5 921 aa10.28□□□□□ -0.76
HDAC6-207ENST00000430858 A0A0A0MRY4 1105 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 CCDC163A0A0D9SF12 145 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 SLC12A8A0AV02 714 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 K7EQS6 105 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 SART1O43290 800 aaKnown RBP10.27□□□□□ -0.77
HDAC6-207ENST00000430858 KAT7O95251 611 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 KLKB1P03952 638 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 CORO1AP31146 461 aaKnown RBP10.27□□□□□ -0.77
HDAC6-207ENST00000430858 CNR2P34972 360 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 CHKAP35790 457 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 GRIA2P42262 883 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 SLC6A11P48066 632 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 MRPS21P82921 87 aaKnown RBP10.27□□□□□ -0.77
HDAC6-207ENST00000430858 MYL5Q02045 173 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 KCNMA1Q12791 1236 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 TRIP4Q15650 581 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-207ENST00000430858 HSF5Q4G112 596 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-207ENST00000430858 CDKAL1Q5VV42 579 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 DENND1BQ6P3S1 775 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 PKN3Q6P5Z2 889 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 TPGS1Q6ZTW0 290 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 C11orf57Q6ZUT1 292 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-207ENST00000430858 NUDT18Q6ZVK8 323 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 SYT13Q7L8C5 426 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 LONP2Q86WA8 852 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 FMNL3Q8IVF7 1028 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 CAMKK1Q8N5S9 505 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 RPLP0P6Q8NHW5 317 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 USP33Q8TEY7 942 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 EDEM1Q92611 657 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 PLD4Q96BZ4 506 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 XPO6Q96QU8 1125 aaKnown RBP10.27□□□□□ -0.77
HDAC6-207ENST00000430858 BBS2Q9BXC9 721 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 EPC1Q9H2F5 836 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 ACP6Q9NPH0 428 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 ARHGEF4Q9NR80 690 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 ST7Q9NRC1 585 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 FANCLQ9NW38 375 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 C2orf42Q9NWW7 574 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 MARK1Q9P0L2 795 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 DEC1Q9P2X7 70 aa10.27□□□□□ -0.77
HDAC6-207ENST00000430858 HBS1LQ9Y450 684 aaKnown RBP10.27□□□□□ -0.77
HDAC6-207ENST00000430858 MYO16Q9Y6X6 1858 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 TBC1D3BA6NDS4 549 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 NEDD8-MDP1E9PL57 170 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 FOXN3O00409 490 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-207ENST00000430858 PIK3R2O00459 728 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 CACNG3O60359 315 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 TULP3O75386 442 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 LTFP02788 710 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 HMBSP08397 361 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 TYRP14679 529 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 TNFRSF4P43489 277 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 FNTBP49356 437 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 HARS2P49590 506 aaKnown RBP10.26□□□□□ -0.77
HDAC6-207ENST00000430858 BPIFB4P59827 614 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 RAPGEF1Q13905 1077 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 KRT31Q15323 416 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 KLHDC7AQ5VTJ3 777 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 DPY19L2P1Q6NXN4 242 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 MSANTD2Q6P1R3 559 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 BEND5Q7L4P6 421 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 TMEM110Q86TL2 294 aa10.26□□□□□ -0.77
HDAC6-207ENST00000430858 WDR5BQ86VZ2 330 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms