RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 HEPHQ9BQS7 1158 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 C17orf75Q9HAS0 396 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 DDX4Q9NQI0 724 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 MYPNQ86TC9 1320 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 ARHGEF35A5YM69 484 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 SDR42E2A6NKP2 422 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 TNFAIP8O95379 198 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 SERPINA6P08185 405 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 TCP10Q12799 353 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 SNRNP35Q16560 246 aaKnown RBP11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 CLVS1Q8IUQ0 354 aaPredicted RBP11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 CROCCP3Q8IVE0 287 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 PDIK1LQ8N165 341 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 DEPTORQ8TB45 409 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 RSAD2Q8WXG1 361 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 ATP2A3Q93084 1043 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 XAB2Q9HCS7 855 aaKnown RBP11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 KLRG2A4D1S0 409 aaPredicted RBP11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 K7EPI3 171 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 CST8O60676 142 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 UFL1O94874 794 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 FUCA1P04066 466 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 HMGB2P26583 209 aaKnown RBP11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 RCVRNP35243 200 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 CTBSQ01459 385 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 ITGA7Q13683 1181 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 KLHL38Q2WGJ6 581 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 BORAQ6PGQ7 559 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 TMEM270Q6UE05 265 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 OTOP1Q7RTM1 612 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 TSPAN14Q8NG11 270 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 PKP2Q99959 881 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 LXNQ9BS40 222 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 UTP6Q9NYH9 597 aaKnown RBP11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 PCSK1NQ9UHG2 260 aa11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 APOBEC2Q9Y235 224 aaKnown RBP11.68□□□□□ -0.54
SEC61A1-202ENST00000424880 SF3B1O75533 1304 aaKnown RBP eCLIP11.68□□□□□ -0.542e-7■■■■■ 70.2
SEC61A1-202ENST00000424880 NEMP1O14524 444 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 EPHA3P29320 983 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 TMED10P49755 219 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 NUDT2P50583 147 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 RAB15P59190 212 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 OGDHQ02218 1023 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 TAF5Q15542 800 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 MFSD14BQ5SR56 506 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 CYP4A22Q5TCH4 519 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 AAGABQ6PD74 315 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 NPNTQ6UXI9 565 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 KYAT3Q6YP21 454 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SH2D5Q6ZV89 423 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SV2AQ7L0J3 742 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 MAVSQ7Z434 540 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 KBTBD6Q86V97 674 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 HACE1Q8IYU2 909 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 MARVELD2Q8N4S9 558 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 TTLL6Q8N841 843 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 MARK4Q96L34 752 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 MRPS26Q9BYN8 205 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 CD209Q9NNX6 404 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SACM1LQ9NTJ5 587 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 PLK2Q9NYY3 685 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 PLLPQ9Y342 182 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 NUB1Q9Y5A7 615 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 MYH9P35579 1960 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 ZNFX1Q9P2E3 1918 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 FUOMA2VDF0 154 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 PLOD2O00469 737 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 ENTPD3O75355 529 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 OCM2P0CE71 109 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 OCMP0CE72 109 aaPredicted RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 XRCC1P18887 633 aaPredicted RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 CD247P20963 164 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SCNN1DP51172 638 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 TRMT10BQ6PF06 316 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SPOCD1Q6ZMY3 1216 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 CHSY1Q86X52 802 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SNX29P2Q8IUI4 249 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SNX27Q96L92 541 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SMYD2Q9NRG4 433 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 VPS51Q9UID3 782 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 COQ6Q9Y2Z9 468 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SH3PXD2BA1X283 911 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 hCG_1984214I3L0E3 225 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 GAS7O60861 476 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 CBFA2T3O75081 653 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 OXSR1O95747 527 aaPredicted RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 ARP10275 920 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 ARRB2P32121 409 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 RHBDL3P58872 404 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 MS4A2Q01362 244 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 CIAPIN1Q6FI81 312 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 SLC2A7Q6PXP3 512 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 FBXW8Q8N3Y1 598 aa11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 ZNF713Q8N859 430 aaPredicted RBP11.67□□□□□ -0.54
SEC61A1-202ENST00000424880 EXD1Q8NHP7 514 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms