RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 HSFY1Q96LI6 401 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 ACP6Q9NPH0 428 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 SPHK2Q9NRA0 654 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 ANO10Q9NW15 660 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 RASAL2Q9UJF2 1139 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 AJAP1Q9UKB5 411 aaPredicted RBP21.3■■□□□ 1
GTF3A-202ENST00000419181 HOXC11O43248 304 aaPredicted RBP21.29■■□□□ 1
GTF3A-202ENST00000419181 LETM1O95202 739 aaPredicted RBP21.29■■□□□ 1
GTF3A-202ENST00000419181 GNA15P30679 374 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 GPD2P43304 727 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 NRLP54845 237 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 COG7P83436 770 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 GAD2Q05329 585 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 STX1AQ16623 288 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 BSPRYQ5W0U4 402 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 BTBD8Q5XKL5 378 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 TMEM25Q86YD3 366 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 ZNF606Q8WXB4 792 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 ATRIPQ8WXE1 791 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 MARCH2Q9P0N8 246 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 WDR87Q6ZQQ6 2873 aa21.29■■□□□ 1
GTF3A-202ENST00000419181 THAP12O43422 761 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 MED7O43513 233 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 LILRB5O75023 590 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 ATG13O75143 517 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 SLC6A11P48066 632 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 RPL34P49207 117 aaKnown RBP21.28■■□□□ 1
GTF3A-202ENST00000419181 MESP2Q0VG99 397 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 KCNMA1Q12791 1236 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 DENND1BQ6P3S1 775 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 ETFBKMTQ8IXQ9 262 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 IRGQQ8WZA9 623 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 ABCC13Q9NSE7 274 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 OLA1Q9NTK5 396 aaKnown RBP21.28■■□□□ 1
GTF3A-202ENST00000419181 TMEM63CQ9P1W3 806 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 DNAJC12Q9UKB3 198 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 STRIP2Q9ULQ0 834 aa21.28■■□□□ 1
GTF3A-202ENST00000419181 GVINP1Q7Z2Y8 2422 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 OTOGLQ3ZCN5 2332 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.27■■□□□ 1
GTF3A-202ENST00000419181 K7EQS6 105 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 PIK3R2O00459 728 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 FBXO21O94952 628 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 LMNAP02545 664 aaKnown RBP21.27■■□□□ 1
GTF3A-202ENST00000419181 KLKB1P03952 638 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 HOXA6P31267 233 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 USP8P40818 1118 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 PHTF2Q8N3S3 785 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 RPLP0P6Q8NHW5 317 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 STK32AQ8WU08 396 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 EDEM1Q92611 657 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 PNKPQ96T60 521 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 TAB2Q9NYJ8 693 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 MARK1Q9P0L2 795 aa21.27■■□□□ 1
GTF3A-202ENST00000419181 GPR179Q6PRD1 2367 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 EP300Q09472 2414 aaPredicted RBP21.26■□□□□ 0.99
GTF3A-202ENST00000419181 SLC12A8A0AV02 714 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 PES1O00541 588 aaKnown RBP21.26■□□□□ 0.99
GTF3A-202ENST00000419181 KAT7O95251 611 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 ANO4Q32M45 955 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 CCDC26Q8TAB7 109 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 CLEC4CQ8WTT0 213 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 RNF139Q8WU17 664 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 DCLK3Q9C098 648 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 FANCLQ9NW38 375 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 CYTH4Q9UIA0 394 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 ZNF510Q9Y2H8 683 aa21.26■□□□□ 0.99
GTF3A-202ENST00000419181 PTPRZ1P23471 2315 aaPredicted RBP21.26■□□□□ 0.99
GTF3A-202ENST00000419181 A0A0A0MRY4 1105 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 FOXN3O00409 490 aaPredicted RBP21.25■□□□□ 0.99
GTF3A-202ENST00000419181 TULP3O75386 442 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 HMBSP08397 361 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 CHRM1P11229 460 aaPredicted RBP21.25■□□□□ 0.99
GTF3A-202ENST00000419181 CORO1AP31146 461 aaKnown RBP21.25■□□□□ 0.99
GTF3A-202ENST00000419181 HOXC13P31276 330 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 MYL5Q02045 173 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 DMWDQ09019 674 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 KRT31Q15323 416 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 SFTPA1Q8IWL2 248 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 SUMF1Q8NBK3 374 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 USP33Q8TEY7 942 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 PLD4Q96BZ4 506 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 BBS2Q9BXC9 721 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 SLC4A5Q9BY07 1137 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 ARHGEF4Q9NR80 690 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 ST7Q9NRC1 585 aa21.25■□□□□ 0.99
GTF3A-202ENST00000419181 ZNF292O60281 2723 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 NEDD8-MDP1E9PL57 170 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 CACNG3O60359 315 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 LTFP02788 710 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 APODP05090 189 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 PNMA6AP0CW24 399 aaPredicted RBP21.24■□□□□ 0.99
GTF3A-202ENST00000419181 GRIA2P42262 883 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 ACADSBP45954 432 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 KDSRQ06136 332 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 TYRO3Q06418 890 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 TRIP4Q15650 581 aaPredicted RBP21.24■□□□□ 0.99
GTF3A-202ENST00000419181 KLHDC7AQ5VTJ3 777 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 MSANTD2Q6P1R3 559 aa21.24■□□□□ 0.99
GTF3A-202ENST00000419181 TPGS1Q6ZTW0 290 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms