RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ENOSF1Q7L5Y1 443 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 KIAA2013Q8IYS2 634 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 SCML4Q8N228 414 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 PHTF2Q8N3S3 785 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 GPR161Q8N6U8 529 aaKnown RBP17.27■□□□□ 0.36
LINC00404-201ENST00000418660 NDRG1Q92597 394 aaKnown RBP17.27■□□□□ 0.36
LINC00404-201ENST00000418660 FAM81BQ96LP2 452 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 IPO9Q96P70 1041 aaKnown RBP17.27■□□□□ 0.36
LINC00404-201ENST00000418660 HHIPQ96QV1 700 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 DCLK3Q9C098 648 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 CNGB3Q9NQW8 809 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 MARK1Q9P0L2 795 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 MARCH2Q9P0N8 246 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 DACH1Q9UI36 760 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 GMEB2Q9UKD1 530 aa17.27■□□□□ 0.36
LINC00404-201ENST00000418660 FAM186AA6NE01 2351 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 VPS13AQ96RL7 3174 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 ANTXRLA6NF34 631 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 APBB3O95704 486 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 KLKB1P03952 638 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 ERCC5P28715 1186 aaPredicted RBP17.26■□□□□ 0.35
LINC00404-201ENST00000418660 LPAL2Q16609 132 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 DPCR1Q3MIW9 517 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 BSPRYQ5W0U4 402 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 TPGS1Q6ZTW0 290 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 NUDT18Q6ZVK8 323 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 CEP68Q76N32 757 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 SFTPA1Q8IWL2 248 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 GAB3Q8WWW8 586 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 XPO6Q96QU8 1125 aaKnown RBP17.26■□□□□ 0.35
LINC00404-201ENST00000418660 CRACR2AQ9BSW2 395 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 BBS2Q9BXC9 721 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 THAP9Q9H5L6 903 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 OLA1Q9NTK5 396 aaKnown RBP17.26■□□□□ 0.35
LINC00404-201ENST00000418660 EBF1Q9UH73 591 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 MMP17Q9ULZ9 603 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 KIAA1549LQ6ZVL6 1849 aa17.26■□□□□ 0.35
LINC00404-201ENST00000418660 PTPRZ1P23471 2315 aaPredicted RBP17.25■□□□□ 0.35
LINC00404-201ENST00000418660 GTPBP10A4D1E9 387 aaKnown RBP17.25■□□□□ 0.35
LINC00404-201ENST00000418660 TBC1D3BA6NDS4 549 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 YJEFN3A6XGL0 299 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 E7ENQ6 273 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 NEDD8-MDP1E9PL57 170 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 M0QYV0 167 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 AXIN1O15169 862 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 CACNG3O60359 315 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 RPP40O75818 363 aaKnown RBP17.25■□□□□ 0.35
LINC00404-201ENST00000418660 GABBR2O75899 941 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 CALCAP01258 141 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 RETP07949 1114 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 HMBSP08397 361 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 CHRM1P11229 460 aaPredicted RBP17.25■□□□□ 0.35
LINC00404-201ENST00000418660 KRT5P13647 590 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 LCP1P13796 627 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 TYRP14679 529 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 SLC9A1P19634 815 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 KIR2DL1P43626 348 aaPredicted RBP17.25■□□□□ 0.35
LINC00404-201ENST00000418660 MTIF2P46199 727 aaKnown RBP17.25■□□□□ 0.35
LINC00404-201ENST00000418660 MFAP3P55082 362 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 DAOAP59103 153 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 PMF1Q6P1K2 205 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 TRIM65Q6PJ69 517 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 GBP6Q6ZN66 633 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 FAM114A1Q8IWE2 563 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 CCDC33Q8N5R6 958 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 TERB1Q8NA31 727 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 IL17RCQ8NAC3 791 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 KCNV2Q8TDN2 545 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 RNF139Q8WU17 664 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 IRGQQ8WZA9 623 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 HSFY1Q96LI6 401 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 GBP4Q96PP9 640 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 ABCC13Q9NSE7 274 aa17.25■□□□□ 0.35
LINC00404-201ENST00000418660 OTOGLQ3ZCN5 2332 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 SLC12A8A0AV02 714 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 CORO1AP31146 461 aaKnown RBP17.24■□□□□ 0.35
LINC00404-201ENST00000418660 TIE1P35590 1138 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 CHKAP35790 457 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 RGS7P49802 495 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 CRY1Q16526 586 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 MAN2A1Q16706 1144 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 EXOC3L4Q17RC7 722 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 CT47A1Q5JQC4 288 aaPredicted RBP17.24■□□□□ 0.35
LINC00404-201ENST00000418660 EMC10Q5UCC4 262 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 GRAMD4Q6IC98 578 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.24■□□□□ 0.35
LINC00404-201ENST00000418660 ALLCQ8N6M5 410 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 TSTD1Q8NFU3 115 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 PLD4Q96BZ4 506 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 DNAJC17Q9NVM6 304 aaKnown RBP17.24■□□□□ 0.35
LINC00404-201ENST00000418660 APEX2Q9UBZ4 518 aa17.24■□□□□ 0.35
LINC00404-201ENST00000418660 GVINP1Q7Z2Y8 2422 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 TRIM24O15164 1050 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 MED7O43513 233 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 KLF8O95600 359 aaPredicted RBP17.23■□□□□ 0.35
LINC00404-201ENST00000418660 DGKEP52429 567 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 TRIP4Q15650 581 aaPredicted RBP17.23■□□□□ 0.35
LINC00404-201ENST00000418660 MEA1Q16626 185 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 EOGTQ5NDL2 527 aa17.23■□□□□ 0.35
LINC00404-201ENST00000418660 C10orf76Q5T2E6 689 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms