RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HMBSP08397 361 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 GPD2P43304 727 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 SLC6A11P48066 632 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 DENND1BQ6P3S1 775 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 C12orf40Q86WS4 652 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 EDEM1Q92611 657 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 HSFY1Q96LI6 401 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 VPS16Q9H269 839 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 SPHK2Q9NRA0 654 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 FANCLQ9NW38 375 aa19.75■□□□□ 0.75
TRIM56-202ENST00000412507 TDGF1P13385 188 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 COG7P83436 770 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 GAD2Q05329 585 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 PPP2R5DQ14738 602 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 KRT31Q15323 416 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 BSPRYQ5W0U4 402 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 ZC3H14Q6PJT7 736 aaKnown RBP19.74■□□□□ 0.75
TRIM56-202ENST00000412507 TMEM25Q86YD3 366 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 SCML4Q8N228 414 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 CLEC4CQ8WTT0 213 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 NKD2Q969F2 451 aaPredicted RBP19.74■□□□□ 0.75
TRIM56-202ENST00000412507 MARCH2Q9P0N8 246 aa19.74■□□□□ 0.75
TRIM56-202ENST00000412507 SLC12A8A0AV02 714 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 FOXN3O00409 490 aaPredicted RBP19.73■□□□□ 0.75
TRIM56-202ENST00000412507 PNMA6AP0CW24 399 aaPredicted RBP19.73■□□□□ 0.75
TRIM56-202ENST00000412507 TYRO3Q06418 890 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 ANO4Q32M45 955 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 FBXO43Q4G163 708 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 CAVIN1Q6NZI2 390 aaKnown RBP19.73■□□□□ 0.75
TRIM56-202ENST00000412507 Q6ZNB5 142 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 ASCL5Q7RTU5 278 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 NAT16Q8N8M0 369 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 NELL1Q92832 810 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 LSM14BQ9BX40 385 aaKnown RBP19.73■□□□□ 0.75
TRIM56-202ENST00000412507 MIS12Q9H081 205 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 ST7Q9NRC1 585 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 ABCC13Q9NSE7 274 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 OLA1Q9NTK5 396 aaKnown RBP19.73■□□□□ 0.75
TRIM56-202ENST00000412507 ZSCAN32Q9NX65 697 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 STRIP2Q9ULQ0 834 aa19.73■□□□□ 0.75
TRIM56-202ENST00000412507 PRR23AA6NEV1 266 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 ANTXRLA6NF34 631 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 GFRA3O60609 400 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 KLKB1P03952 638 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 HOXC13P31276 330 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 RPL34P49207 117 aaKnown RBP19.72■□□□□ 0.75
TRIM56-202ENST00000412507 MYL5Q02045 173 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 KDSRQ06136 332 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 MESP2Q0VG99 397 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 MEA1Q16626 185 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 KLHDC7AQ5VTJ3 777 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 TPGS1Q6ZTW0 290 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 ZBTB44Q8NCP5 570 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 RPLP0P6Q8NHW5 317 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 RNF139Q8WU17 664 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 IRGQQ8WZA9 623 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 PNKPQ96T60 521 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 SFMBT1Q9UHJ3 866 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 CYTH4Q9UIA0 394 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 PCDHGA2Q9Y5H1 932 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 FHOD1Q9Y613 1164 aa19.72■□□□□ 0.75
TRIM56-202ENST00000412507 CHURC1-FNTBB4DL54 471 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 K7EQS6 105 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 K7ESF4 209 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 HOXC11O43248 304 aaPredicted RBP19.71■□□□□ 0.75
TRIM56-202ENST00000412507 ATG13O75143 517 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 FBXO21O94952 628 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 PAPSS2O95340 614 aaPredicted RBP19.71■□□□□ 0.75
TRIM56-202ENST00000412507 LTFP02788 710 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 CORO1AP31146 461 aaKnown RBP19.71■□□□□ 0.75
TRIM56-202ENST00000412507 CLCN1P35523 988 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 EIF2DP41214 584 aaKnown RBP19.71■□□□□ 0.75
TRIM56-202ENST00000412507 SEC13P55735 322 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 PTK2Q05397 1052 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 RAPGEF1Q13905 1077 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 DRAP1Q14919 205 aaPredicted RBP19.71■□□□□ 0.75
TRIM56-202ENST00000412507 FMNL3Q8IVF7 1028 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 SFTPA1Q8IWL2 248 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 SCUBE3Q8IX30 993 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 ETFBKMTQ8IXQ9 262 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 ATRIPQ8WXE1 791 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 SLC4A5Q9BY07 1137 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 FAM126AQ9BYI3 521 aaPredicted RBP19.71■□□□□ 0.75
TRIM56-202ENST00000412507 DCLK3Q9C098 648 aa19.71■□□□□ 0.75
TRIM56-202ENST00000412507 POLR3BQ9NW08 1133 aaPredicted RBP19.71■□□□□ 0.75
TRIM56-202ENST00000412507 PTPRZ1P23471 2315 aaPredicted RBP19.7■□□□□ 0.74
TRIM56-202ENST00000412507 NEDD8-MDP1E9PL57 170 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 TULP3O75386 442 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 KAT7O95251 611 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 APODP05090 189 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 TPM2P07951 284 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 ACADSBP45954 432 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 COPB1P53618 953 aaKnown RBP19.7■□□□□ 0.74
TRIM56-202ENST00000412507 NRLP54845 237 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 DMWDQ09019 674 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 NCAPHQ15003 741 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 ANO6Q4KMQ2 910 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 SLC47A2Q86VL8 602 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 FAM71AQ8IYT1 594 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 AOPEPQ8N6M6 819 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms