RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 CSH1P0DML2 217 aa13.96□□□□□ -0.17
RPGRIP1-202ENST00000400017 CSH2P0DML3 217 aa13.96□□□□□ -0.17
RPGRIP1-202ENST00000400017 NOMO1Q15155 1222 aa13.96□□□□□ -0.17
RPGRIP1-202ENST00000400017 NXNQ6DKJ4 435 aa13.96□□□□□ -0.17
RPGRIP1-202ENST00000400017 ULK2Q8IYT8 1036 aa13.96□□□□□ -0.17
RPGRIP1-202ENST00000400017 SSU72Q9NP77 194 aaKnown RBP13.96□□□□□ -0.17
RPGRIP1-202ENST00000400017 SMYD2Q9NRG4 433 aa13.96□□□□□ -0.17
RPGRIP1-202ENST00000400017 GREB1LQ9C091 1923 aaPredicted RBP13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 AP1G2O75843 785 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 PDGFRBP09619 1106 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 ABCG1P45844 678 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 NEK3P51956 506 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 HSDL1Q3SXM5 330 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 DNAL1Q4LDG9 190 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 ENDOVQ8N8Q3 282 aaKnown RBP13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 STKLD1Q8NE28 680 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 SH3TC2Q8TF17 1288 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 KIF12Q96FN5 646 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 B3GNT5Q9BYG0 378 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 ZCWPW1Q9H0M4 648 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 KCNK4Q9NYG8 393 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 PCDHGC3Q9UN70 934 aa13.96□□□□□ -0.18
RPGRIP1-202ENST00000400017 SLX4Q8IY92 1834 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 MYH9P35579 1960 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 TAF1LQ8IZX4 1826 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 WDR27A2RRH5 827 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 CREB3O43889 395 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 HOXC6P09630 235 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 DSG1Q02413 1049 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 TCHHL1Q5QJ38 904 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 N4BP2L1Q5TBK1 243 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 UNC5AQ6ZN44 842 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 MPP5Q8N3R9 675 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 PLD5Q8N7P1 536 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 DNAAF3Q8N9W5 541 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 NRG4Q8WWG1 115 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 FAM167AQ96KS9 214 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 CPSF3Q9UKF6 684 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 MAGEA13PA6NCF6 341 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 NEMP1O14524 444 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 LIN7AO14910 233 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 RARBP10826 455 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 ZNF143P52747 638 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 PEX6Q13608 980 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 TRIP10Q15642 601 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 NIPA2Q8N8Q9 360 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 C1orf127Q8N9H9 656 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 SLC4A11Q8NBS3 891 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 COPS5Q92905 334 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 SKA1Q96BD8 255 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 PTCD3Q96EY7 689 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 CDT1Q9H211 546 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 STX18Q9P2W9 335 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 TEX264Q9Y6I9 313 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 SIPA1L1O43166 1804 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 C3orf70A6NLC5 250 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 MAFO75444 373 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 STK10O94804 968 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 FARP2O94887 1054 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 F7P08709 466 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 ANPEPP15144 967 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 GBE1Q04446 702 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 TMEM132DQ14C87 1099 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 CA9Q16790 459 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 CTC1Q2NKJ3 1217 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 CDKL3Q8IVW4 592 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 NT5C1AQ9BXI3 368 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 CNTN6Q9UQ52 1028 aa13.95□□□□□ -0.18
RPGRIP1-202ENST00000400017 CCDC189A1A4V9 331 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 CHADO15335 359 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 HSPA4LO95757 839 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 PROCP04070 461 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 CYP2F1P24903 491 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 ARL4AP40617 200 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 BOLA3Q53S33 107 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 GLRA4Q5JXX5 417 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 PPP1R15BQ5SWA1 713 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 PGBD4Q96DM1 585 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 SNRNP25Q9BV90 132 aaKnown RBP13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 KCNK13Q9HB14 408 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 CYLDQ9NQC7 956 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 ACSS2Q9NR19 701 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 EFR3BQ9Y2G0 817 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 TRAFD1O14545 582 aaPredicted RBP13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 PLSCR1O15162 318 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 ATXN1P54253 815 aaKnown RBP13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 KCNT2Q6UVM3 1135 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 CHSY1Q86X52 802 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 GSDMBQ8TAX9 411 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 ZNF212Q9UDV6 495 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 ZNF831Q5JPB2 1677 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 A0A087WZ62 844 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 PIGRP01833 764 aa13.94□□□□□ -0.18
RPGRIP1-202ENST00000400017 VTNP04004 478 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms