RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 H3BQ06 376 aaPredicted RBP7.87□□□□□ -1.15
USP16-204ENST00000399976 HOXC11O43248 304 aaPredicted RBP7.87□□□□□ -1.15
USP16-204ENST00000399976 AP5Z1O43299 807 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 CLSTN1O94985 981 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 SPATA31D3P0C874 917 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 MYL4P12829 197 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 DESP17661 470 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 TNFAIP3P21580 790 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 APBA1Q02410 837 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 HSF5Q4G112 596 aaPredicted RBP7.87□□□□□ -1.15
USP16-204ENST00000399976 SPATA31D4Q6ZUB0 917 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 ZNF571Q7Z3V5 609 aaPredicted RBP7.87□□□□□ -1.15
USP16-204ENST00000399976 SYNPOQ8N3V7 929 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 ZSCAN18Q8TBC5 510 aaPredicted RBP7.87□□□□□ -1.15
USP16-204ENST00000399976 BPIFB1Q8TDL5 484 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 GIPC2Q8TF65 315 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 KHSRPQ92945 711 aaKnown RBP eCLIP7.87□□□□□ -1.154e-7■■■■□ 21
USP16-204ENST00000399976 IRF7Q92985 503 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 HAUS4Q9H6D7 363 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 PARVAQ9NVD7 372 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 A0A1W2PRU2 124 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 COCHO43405 550 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 TLR5O60602 858 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 TMEM253P0C7T8 217 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 RARGP13631 454 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 AVPR1AP37288 418 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 ARHGAP25P42331 645 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 CCDC142Q17RM4 750 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 SLC25A52Q3SY17 297 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 BSPRYQ5W0U4 402 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 BTBD8Q5XKL5 378 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 GET4Q7L5D6 327 aaPredicted RBP7.87□□□□□ -1.15
USP16-204ENST00000399976 USP13Q92995 863 aaPredicted RBP7.87□□□□□ -1.15
USP16-204ENST00000399976 ATP2A3Q93084 1043 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 C1orf74Q96LT6 269 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 PCDHB18PQ96TA0 734 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 NELL2Q99435 816 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 FAM83CQ9BQN1 747 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.87□□□□□ -1.15
USP16-204ENST00000399976 ARHGEF38Q9NXL2 777 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 ARHGAP20Q9P2F6 1191 aa7.87□□□□□ -1.15
USP16-204ENST00000399976 LSM7Q9UK45 103 aaKnown RBP7.87□□□□□ -1.15
USP16-204ENST00000399976 A0A1W2PQH9 124 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.86□□□□□ -1.15
USP16-204ENST00000399976 E5RJQ4 531 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 DDX3XO00571 662 aaKnown RBP eCLIP7.86□□□□□ -1.153e-11■■■■■ 50.4
USP16-204ENST00000399976 MAN2B1O00754 1011 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 NPC1O15118 1278 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 FYNP06241 537 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 STARD6P59095 220 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 VITQ6UXI7 678 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 SCAMP5Q8TAC9 235 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 ADAMTS19Q8TE59 1207 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 TCEAL4Q96EI5 215 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 SHDQ96IW2 340 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 PDLIM2Q96JY6 352 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP16-204ENST00000399976 NAGPAQ9UK23 515 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 PJA2O43164 708 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 NFATC1O95644 943 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 HDCP19113 662 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 CXCR3P49682 368 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 OXCT1P55809 520 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 ORC1Q13415 861 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 E4F1Q66K89 784 aaPredicted RBP7.86□□□□□ -1.15
USP16-204ENST00000399976 FAM183BPQ6ZVS7 135 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 RALGPS2Q86X27 583 aaPredicted RBP7.86□□□□□ -1.15
USP16-204ENST00000399976 RHOT2Q8IXI1 618 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 GJD3Q8N144 294 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 CPA6Q8N4T0 437 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP16-204ENST00000399976 UBA3Q8TBC4 463 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 SLC20A1Q8WUM9 679 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 HAPLN3Q96S86 360 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 GRPEL1Q9HAV7 217 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 KCNK12Q9HB15 430 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP16-204ENST00000399976 FBXO10Q9UK96 956 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 GOLGA6L3A6NEY3 463 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 C2CD4BA6NLJ0 364 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 YJEFN3A6XGL0 299 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 KCNU1A8MYU2 1149 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 E7ENQ6 273 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 SOAT2O75908 522 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 PAPSS2O95340 614 aaPredicted RBP7.86□□□□□ -1.15
USP16-204ENST00000399976 PCK1P35558 622 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 CYLC1P35663 651 aaPredicted RBP7.86□□□□□ -1.15
USP16-204ENST00000399976 CHKAP35790 457 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 USP8P40818 1118 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 KCNQ1P51787 676 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 ZXDAP98168 799 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 SIGLEC14Q08ET2 396 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 MTF1Q14872 753 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 ZNF783Q6ZMS7 281 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 RNF135Q8IUD6 432 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 ARID3BQ8IVW6 561 aaPredicted RBP7.86□□□□□ -1.15
USP16-204ENST00000399976 SLC44A3Q8N4M1 653 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 FAM71BQ8TC56 605 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 RNF139Q8WU17 664 aa7.86□□□□□ -1.15
USP16-204ENST00000399976 EDAQ92838 391 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms