RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 GINM1Q9NU53 330 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 COL22A1Q8NFW1 1626 aaPredicted RBP9.01□□□□□ -0.97
RETREG1-202ENST00000399793 BAZ2AQ9UIF9 1905 aaKnown RBP9.01□□□□□ -0.97
RETREG1-202ENST00000399793 RREB1Q92766 1687 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 A0A087WXM4 84 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 GTPBP10A4D1E9 387 aaKnown RBP9.01□□□□□ -0.97
RETREG1-202ENST00000399793 PLOD2O00469 737 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 TNPO2O14787 897 aaKnown RBP9.01□□□□□ -0.97
RETREG1-202ENST00000399793 SNAP91O60641 907 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 ZMPSTE24O75844 475 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 MTA2O94776 668 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 ALOX5P09917 674 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 MCF2P10911 925 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 DCKP27707 260 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 ETV3P41162 512 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 KRT6CP48668 564 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 CALCRLQ16602 461 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 INAVAQ3KP66 663 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 TJAP1Q5JTD0 557 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 POTEAQ6S8J7 498 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 TMC5Q6UXY8 1006 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 KRT25Q7Z3Z0 450 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 CRLF3Q8IUI8 442 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 GLIS1Q8NBF1 620 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 DCAKDQ8WVC6 231 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 KBTBD7Q8WVZ9 684 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 MTMR9Q96QG7 549 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 TCF12Q99081 682 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 TRIT1Q9H3H1 467 aaKnown RBP9.01□□□□□ -0.97
RETREG1-202ENST00000399793 SLC52A2Q9HAB3 445 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 IFT122Q9HBG6 1241 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 MOV10Q9HCE1 1003 aaKnown RBP9.01□□□□□ -0.97
RETREG1-202ENST00000399793 DNMT3BQ9UBC3 853 aaKnown RBP9.01□□□□□ -0.97
RETREG1-202ENST00000399793 KLQ9UEF7 1012 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 PCM1Q15154 2024 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 CLUHO75153 1309 aa9.01□□□□□ -0.97
RETREG1-202ENST00000399793 DENND3A2RUS2 1198 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 AP3B1O00203 1094 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 FOXN3O00409 490 aaPredicted RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 DNALI1O14645 258 aaPredicted RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 HOXC11O43248 304 aaPredicted RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 KLHL2O95198 593 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 CAPNS1P04632 268 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ATP5BP06576 529 aaKnown RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 KRT10P13645 584 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 GLULP15104 373 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 PTPN1P18031 435 aaKnown RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 GRK2P25098 689 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 RFC1P35251 1148 aaPredicted RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 HPCAL1P37235 193 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 FXR2P51116 673 aaKnown RBP eCLIP9□□□□□ -0.97
RETREG1-202ENST00000399793 P2RX3P56373 397 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 EIF2B5Q13144 721 aaKnown RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 PMS2P3Q13401 168 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 C15orf59Q2T9L4 293 aaPredicted RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 FRMD7Q6ZUT3 714 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 TBCKQ8TEA7 893 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 TFB1MQ8WVM0 346 aaKnown RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 E2F7Q96AV8 911 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 DHRS4Q9BTZ2 278 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 NPLQ9BXD5 320 aaPredicted RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 C20orf27Q9GZN8 174 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ZMAT5Q9UDW3 170 aaKnown RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 SEPT3Q9UH03 358 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 A0A0B4J269 797 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 CCRL2O00421 344 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 BBOX1O75936 387 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ALX3O95076 343 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ZSCAN5DPP0CG00 497 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 BDNFP23560 247 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 NMT1P30419 496 aaKnown RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 IDUAP35475 653 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 MLLT10P55197 1068 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 CENPCQ03188 943 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 NFATC3Q12968 1075 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 TUBB3Q13509 450 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 DNASE1L3Q13609 305 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 CHI3L2Q15782 390 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ATAD3BQ5T9A4 648 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ATG16L1Q676U5 607 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ZFP1Q6P2D0 407 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 KIF6Q6ZMV9 814 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 DCP2Q8IU60 420 aaKnown RBP9□□□□□ -0.97
RETREG1-202ENST00000399793 PHF6Q8IWS0 365 aaKnown RBP eCLIP9□□□□□ -0.97
RETREG1-202ENST00000399793 TERB1Q8NA31 727 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 NEDD1Q8NHV4 660 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 FEM1CQ96JP0 617 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 C1orf50Q9BV19 199 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 CNNM1Q9NRU3 951 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 GDAP2Q9NXN4 497 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 BARHL2Q9NY43 387 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 DNM3Q9UQ16 869 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ANGPTL3Q9Y5C1 460 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 PCDHB13Q9Y5F0 798 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 LAMB1P07942 1786 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 TMEM2Q9UHN6 1383 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 TRIM64BA6NI03 449 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 E9PMD0 336 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 SCO2O43819 266 aa9□□□□□ -0.97
RETREG1-202ENST00000399793 ACAT1P24752 427 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms