RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 COQ4Q9Y3A0 265 aa12.45□□□□□ -0.42
SMIM11A-201ENST00000399292 BICDL2A1A5D9 508 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 OTOL1A6NHN0 477 aaPredicted RBP12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 BEST1O76090 585 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 ARSAP15289 507 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 ADORA2BP29275 332 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 PPP2R5DQ14738 602 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 CCDC40Q4G0X9 1142 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 ZNF394Q53GI3 561 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 HECTD3Q5T447 861 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 SNX30Q5VWJ9 437 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 FOXR2Q6PJQ5 311 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 ASCL5Q7RTU5 278 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 PHTF2Q8N3S3 785 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 CPA6Q8N4T0 437 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 ZMIZ2Q8NF64 920 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 NELFBQ8WX92 580 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 ATP2A3Q93084 1043 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 EXOC4Q96A65 974 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 HEXIM2Q96MH2 286 aaKnown RBP12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 DUSP9Q99956 384 aaKnown RBP12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 FAM124BQ9H5Z6 455 aaPredicted RBP12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 ECT2Q9H8V3 914 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 CISHQ9NSE2 258 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 WNT6Q9Y6F9 365 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 R4GN57 208 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 SPTBN4Q9H254 2564 aa12.44□□□□□ -0.42
SMIM11A-201ENST00000399292 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 FAM92AA1XBS5 289 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 PRR23AA6NEV1 266 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 LEFTY2O00292 366 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 OLFM2O95897 454 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 OAS1P00973 400 aaKnown RBP12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 CCR3P51677 355 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 ZXDBP98169 803 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 FOXK2Q01167 660 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 CETN1Q12798 172 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 GRSF1Q12849 480 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 USP4Q13107 963 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 CAMK4Q16566 473 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 EML3Q32P44 896 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 TTI2Q6NXR4 508 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 TSSK4Q6SA08 328 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 CLEC20AQ6ZU45 233 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 DDX42Q86XP3 938 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 SYNPOQ8N3V7 929 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 SPEM1Q8N4L4 309 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 KIAA1958Q8N8K9 716 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 ATRIPQ8WXE1 791 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 SLC35C1Q96A29 364 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 DUSP16Q9BY84 665 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 LINC00597Q9H2U6 94 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 RBM12Q9NTZ6 932 aaKnown RBP12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 CPQQ9Y646 472 aa12.43□□□□□ -0.42
SMIM11A-201ENST00000399292 TRDMT1O14717 391 aaKnown RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 SLC9A3R1O14745 358 aaPredicted RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 FGFR1OPO95684 399 aaKnown RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 GNA14O95837 355 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 IGHA1P01876 353 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 LMNAP02545 664 aaKnown RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 THBS1P07996 1170 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 ZDHHC11BP0C7U3 371 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 MBL2P11226 248 aaPredicted RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 GJA4P35212 333 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 CXCL12P48061 93 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 FMO5P49326 533 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 GALK1P51570 392 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 RAD23BP54727 409 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 NRLP54845 237 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 STX17P56962 302 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 PAK1Q13153 545 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 CUL2Q13617 745 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 CCINQ13939 588 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 TMEM196Q5HYL7 178 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 TRIML1Q8N9V2 468 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 SLC4A11Q8NBS3 891 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 FAM126AQ9BYI3 521 aaPredicted RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 NACA2Q9H009 215 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 GPAMQ9HCL2 828 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 PNPLA8Q9NP80 782 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 PRMT8Q9NR22 394 aaPredicted RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 TLR8Q9NR97 1041 aaKnown RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 ZSCAN32Q9NX65 697 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 SMPD4Q9NXE4 827 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 GMIPQ9P107 970 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 DOLKQ9UPQ8 538 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 CTNND2Q9UQB3 1225 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 PCDHGA2Q9Y5H1 932 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 F5P12259 2224 aa12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
SMIM11A-201ENST00000399292 PMM2O15305 246 aa12.41□□□□□ -0.42
SMIM11A-201ENST00000399292 COCHO43405 550 aa12.41□□□□□ -0.42
SMIM11A-201ENST00000399292 NFATC1O95644 943 aa12.41□□□□□ -0.42
SMIM11A-201ENST00000399292 ACO1P21399 889 aaKnown RBP12.41□□□□□ -0.42
SMIM11A-201ENST00000399292 DRD1P21728 446 aa12.41□□□□□ -0.42
SMIM11A-201ENST00000399292 PTPRZ1P23471 2315 aaPredicted RBP12.41□□□□□ -0.42
SMIM11A-201ENST00000399292 TUBP50607 506 aa12.41□□□□□ -0.42
SMIM11A-201ENST00000399292 SLC8A3P57103 927 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms