RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 VANGL2Q9ULK5 521 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ZNRF3Q9ULT6 936 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 UBQLN1Q9UMX0 589 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 SCAF8Q9UPN6 1271 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 F5H5T6 163 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 UBXN8O00124 270 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 TK2O00142 265 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 DDHD2O94830 711 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 NUP62P37198 522 aaPredicted RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 RPL21P46778 160 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 SLC11A2P49281 568 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 NEDD8Q15843 81 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 USP39Q53GS9 565 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 CDKAL1Q5VV42 579 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 TYW3Q6IPR3 259 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 TMC3Q7Z5M5 1100 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ATXN2LQ8WWM7 1075 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 ANKRD27Q96NW4 1050 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 CGRRF1Q99675 332 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 C6orf62Q9GZU0 229 aaPredicted RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 UBP1Q9NZI7 540 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 TULP4Q9NRJ4 1543 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 FCHO1O14526 889 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 TRIM13O60858 407 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.47
TMF1-201ENST00000398559 MCL1Q07820 350 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 TROAPQ12815 778 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 MAPK11Q15759 364 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 DDR2Q16832 855 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ARMC4Q5T2S8 1044 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 SLC22A9Q8IVM8 553 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 EMC1Q8N766 993 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 RAET1EQ8TD07 263 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 GPRASP2Q96D09 838 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 CYP39A1Q9NYL5 469 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 RAD54BQ9Y620 910 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ZCCHC11Q5TAX3 1644 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 ASNA1O43681 348 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 PAX7P23759 505 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 FAM98BQ52LJ0 330 aaKnown RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 OTUD3Q5T2D3 398 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 VN1R5Q7Z5H4 357 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 PTAR1Q7Z6K3 402 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 RMND5BQ96G75 393 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 CYLDQ9NQC7 956 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 CYP2F1P24903 491 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 PSMA3P25788 255 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 KRT20P35900 424 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 NPTX2P47972 431 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 CCNG1P51959 295 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 RAD23AP54725 363 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 ZNF844Q08AG5 666 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 XRRA1Q6P2D8 792 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 OR6Y1Q8NGX8 325 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 SPIRE2Q8WWL2 714 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 PHF21BQ96EK2 531 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 CPB2Q96IY4 423 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 FUCA2Q9BTY2 467 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 NFKBIL1Q9UBC1 381 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 KLHL3Q9UH77 587 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 ZMYND8Q9ULU4 1186 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 PCDHB7Q9Y5E2 793 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 GNG14A0A1W2PPG7 69 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 TBC1D12O60347 775 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 GLP2RO95838 553 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 FEN1P39748 380 aaKnown RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 PSMC6P62333 389 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 C1DQ13901 141 aaKnown RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 INAQ16352 499 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 FAM117BQ6P1L5 589 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 UTP15Q8TED0 518 aaKnown RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 SEMA4DQ92854 862 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 PADI4Q9UM07 663 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 C15orf41Q9Y2V0 281 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 ERI2A8K979 691 aaKnown RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 TNFAIP8O95379 198 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 TALDO1P37837 337 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 NAMPTP43490 491 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 RFX5P48382 616 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 IFI35P80217 286 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 DMPKQ09013 629 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 ITGA9Q13797 1035 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 CHST13Q8NET6 341 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 ACOX2Q99424 681 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 CLPBQ9H078 707 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 PCDH9Q9HC56 1237 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 RAD18Q9NS91 495 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 KPNA4O00629 521 aaPredicted RBP12.11□□□□□ -0.47
TMF1-201ENST00000398559 AKAP3O75969 853 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 CYP24A1Q07973 514 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 MGAT5Q09328 741 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 DGKKQ5KSL6 1271 aa12.11□□□□□ -0.47
TMF1-201ENST00000398559 MPZL3Q6UWV2 235 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms