RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 MMP17Q9ULZ9 603 aa10.4□□□□□ -0.74
NIFKP1-201ENST00000398317 PCDHB11Q9Y5F2 797 aa10.4□□□□□ -0.74
NIFKP1-201ENST00000398317 ADAMTS9Q9P2N4 1935 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 PCNX2A6NKB5 2137 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 C4orf47A7E2U8 309 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 SGK1O00141 431 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 RTN3O95197 1032 aaPredicted RBP10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 KAT7O95251 611 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 VNN1O95497 513 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 APODP05090 189 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 IRF1P10914 325 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 ADH5P11766 374 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 CCDC130P13994 396 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 SCTRP47872 440 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 PGFP49763 221 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 SLC5A3P53794 718 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 DLG4P78352 724 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 MRPS21P82921 87 aaKnown RBP10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 DNM1Q05193 864 aaKnown RBP10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 STK4Q13043 487 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 PKP1Q13835 747 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 CRY1Q16526 586 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 ZNF667Q5HYK9 610 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 LY6G5CQ5SRR4 150 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 HECTD3Q5T447 861 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 PMS2CLQ68D20 193 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 ACOT1Q86TX2 421 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 RASSF3Q86WH2 238 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 CEP57L1Q8IYX8 460 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 NAT16Q8N8M0 369 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 IL17RCQ8NAC3 791 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 KIAA0895Q8NCT3 520 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 MDGA1Q8NFP4 955 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 RLN3Q8WXF3 142 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 SNX21Q969T3 373 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 WBP2Q969T9 261 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 PAGE5Q96GU1 130 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 CNOT6LQ96LI5 555 aaKnown RBP10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 EDEM2Q9BV94 578 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 LSM14BQ9BX40 385 aaKnown RBP10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 CCSER2Q9H7U1 834 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 ARHGEF4Q9NR80 690 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 DMAC2Q9NW81 257 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 GMIPQ9P107 970 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 ZFHX4Q86UP3 3567 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 TNRC6BQ9UPQ9 1833 aaKnown RBP10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 ASPMQ8IZT6 3477 aa10.39□□□□□ -0.75
NIFKP1-201ENST00000398317 ATP8B3O60423 1300 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 CACNA1EQ15878 2313 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 E2F8A0AVK6 867 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 FIGNL2A6NMB9 653 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 PATE3B3GLJ2 98 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 TNFRSF10BO14763 440 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 BEST1O76090 585 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 KCNK5O95279 499 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 DHPSP49366 369 aaPredicted RBP10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 ST3GAL2Q16842 350 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 SPOPLQ6IQ16 392 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 PSAPL1Q6NUJ1 521 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 DDX42Q86XP3 938 aaKnown RBP eCLIP10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 BBS7Q8IWZ6 715 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 FUKQ8N0W3 1084 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 FRMD1Q8N878 549 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 KIAA1958Q8N8K9 716 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 PDZD8Q8NEN9 1154 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 ZMIZ2Q8NF64 920 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 GOLGA5Q8TBA6 731 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 OVCA2Q8WZ82 227 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 SMARCD1Q96GM5 515 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 TNIP3Q96KP6 325 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 SMOQ99835 787 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 DMAP1Q9NPF5 467 aaPredicted RBP10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 KRT82Q9NSB4 513 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 EXOC1Q9NV70 894 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 IL37Q9NZH6 218 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 TBC1D14Q9P2M4 693 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 HMGXB4Q9UGU5 601 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 SH3BP1Q9Y3L3 701 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 PLXND1Q9Y4D7 1925 aa10.38□□□□□ -0.75
NIFKP1-201ENST00000398317 CHD6Q8TD26 2715 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 LNP1A1A4G5 178 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 TBC1D3BA6NDS4 549 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 GIPC1O14908 333 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 TRIM24O15164 1050 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 ADAM23O75077 832 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 ALDH1A2O94788 518 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 HSP90AA1P07900 732 aaKnown RBP10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 SLFN14P0C7P3 912 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 ZDHHC11BP0C7U3 371 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 PMLP29590 882 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 EIF2DP41214 584 aaKnown RBP10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 GRIA2P42262 883 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 KIR2DL1P43626 348 aaPredicted RBP10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 NDST1P52848 882 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 AP3M2P53677 418 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 MAP3K7CLP57077 242 aa10.37□□□□□ -0.75
NIFKP1-201ENST00000398317 CLDN10P78369 228 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms