RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 BNIPLQ7Z465 357 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 MRPL43Q8N983 215 aaKnown RBP21.28■■□□□ 1
VCPKMT-202ENST00000395860 ADAM32Q8TC27 787 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 RAPGEF5Q92565 580 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 SLITRK1Q96PX8 696 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 TLR8Q9NR97 1041 aaKnown RBP21.28■■□□□ 1
VCPKMT-202ENST00000395860 INSL5Q9Y5Q6 135 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 MTCL1Q9Y4B5 1905 aaKnown RBP21.28■■□□□ 1
VCPKMT-202ENST00000395860 HIDE1A8MVS5 230 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 GRM6O15303 877 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 TADA3O75528 432 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 SPATA31D3P0C874 917 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 CSH1P0DML2 217 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 CSH2P0DML3 217 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 PSEN1P49768 467 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 ITIH3Q06033 890 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 TWF1Q12792 350 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 VEPH1Q14D04 833 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 LLGL1Q15334 1064 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 TAF12Q16514 161 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 SPATA31D4Q6ZUB0 917 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 ADAT2Q7Z6V5 191 aaKnown RBP21.28■■□□□ 1
VCPKMT-202ENST00000395860 FAM131BQ86XD5 332 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 SLC13A5Q86YT5 568 aaPredicted RBP21.28■■□□□ 1
VCPKMT-202ENST00000395860 KCTD6Q8NC69 237 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 RNF139Q8WU17 664 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 TEKT4Q8WW24 435 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 PGAP3Q96FM1 320 aaPredicted RBP21.28■■□□□ 1
VCPKMT-202ENST00000395860 TTLL2Q9BWV7 592 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 PBX4Q9BYU1 374 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 DDIT4Q9NX09 232 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 KRIT1O00522 736 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 F9P00740 461 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 COPS2P61201 443 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 ERMARDQ5T6L9 678 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 MFSD7Q6UXD7 560 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 SPOCD1Q6ZMY3 1216 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 CMASQ8NFW8 434 aaPredicted RBP21.27■■□□□ 1
VCPKMT-202ENST00000395860 DQX1Q8TE96 717 aaKnown RBP21.27■■□□□ 1
VCPKMT-202ENST00000395860 SNRNP25Q9BV90 132 aaKnown RBP21.27■■□□□ 1
VCPKMT-202ENST00000395860 AP1M1Q9BXS5 423 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 PIGVQ9NUD9 493 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.27■■□□□ 1
VCPKMT-202ENST00000395860 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.27■■□□□ 1
VCPKMT-202ENST00000395860 MSRAQ9UJ68 235 aa21.27■■□□□ 1
VCPKMT-202ENST00000395860 MDM4O15151 490 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 RALAP11233 206 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 KDELR1P24390 212 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 GBP1P32455 592 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 GPM6BQ13491 265 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 RAB30Q15771 203 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 TEX35Q5T0J7 233 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 SND1Q7KZF4 910 aaKnown RBP eCLIP21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 RSRC2Q7L4I2 434 aaKnown RBP21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 TAC4Q86UU9 113 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 CCDC185Q8N715 623 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 OSBPL8Q9BZF1 889 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 RBM12Q9NTZ6 932 aaKnown RBP21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 OSER1Q9NX31 292 aa21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 V9GYY5 206 aaPredicted RBP21.26■□□□□ 0.99
VCPKMT-202ENST00000395860 H3BNC9 293 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 FSCN2O14926 492 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 GLUD1P00367 558 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 TERF1P54274 439 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 EPHB3P54753 998 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 CDH6P55285 790 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 PLD1Q13393 1074 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 LILRA6Q6PI73 481 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 UBXN4Q92575 508 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 HEMGNQ9BXL5 484 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 NKX2-4Q9H2Z4 354 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 GPATCH2LQ9NWQ4 482 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 CLIC5Q9NZA1 410 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 FBXW11Q9UKB1 542 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 UQCRHLA0A096LP55 91 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 GOLGA6L10A0A0M3HER8 536 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 UQCRHP07919 91 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 IRS1P35568 1242 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 CAMK1Q14012 370 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 KRT81Q14533 505 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 TFDP3Q5H9I0 405 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 CCDC149Q6ZUS6 474 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 ANKS1BQ7Z6G8 1248 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 NOA1Q8NC60 698 aaKnown RBP21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 PDZD8Q8NEN9 1154 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 SMOC2Q9H3U7 446 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 CERS4Q9HA82 394 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 NUDT5Q9UKK9 219 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 AP4E1Q9UPM8 1137 aa21.25■□□□□ 0.99
VCPKMT-202ENST00000395860 C3orf70A6NLC5 250 aaPredicted RBP21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 CCDC188H7C350 402 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 RARGP13631 454 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 HMGA1P17096 107 aaKnown RBP21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 GTF2F1P35269 517 aaKnown RBP eCLIP21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 CDKN2BP42772 138 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 TUBB4BP68371 445 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 PDK2Q15119 407 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 PPP2R5EQ16537 467 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 ZC3H12AQ5D1E8 599 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms