RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 CNDP1Q96KN2 507 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 SRPK1Q96SB4 655 aaKnown RBP11.63□□□□□ -0.55
RPGR-203ENST00000378505 SH3GL3Q99963 347 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 SYT15Q9BQS2 421 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 COLEC11Q9BWP8 271 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 TRIM45Q9H8W5 580 aaPredicted RBP11.63□□□□□ -0.55
RPGR-203ENST00000378505 VTA1Q9NP79 307 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 TRMT6Q9UJA5 497 aaKnown RBP11.63□□□□□ -0.55
RPGR-203ENST00000378505 SIGLEC16A6NMB1 481 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 C2orf81A6NN90 581 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 TBC1D12O60347 775 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 FKBP6O75344 327 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 ZNF286BP0CG31 522 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 GLRA2P23416 452 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 KDELR1P24390 212 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 SLC6A3Q01959 620 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 DSG1Q02413 1049 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 CRY2Q49AN0 593 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 TATDN1Q6P1N9 297 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 TMPRSS6Q8IU80 811 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 SCUBE3Q8IX30 993 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 RFWD2Q8NHY2 731 aa11.63□□□□□ -0.55
RPGR-203ENST00000378505 ZNF75CPQ92670 426 aaPredicted RBP11.63□□□□□ -0.55
RPGR-203ENST00000378505 ADGRA2Q96PE1 1338 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 ATP6V1G2O95670 118 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 SERPINE1P05121 402 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 UBA1P22314 1058 aaKnown RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 TM4SF1P30408 202 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 SERPINB5P36952 375 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 ZNF177Q13360 481 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 AUHQ13825 339 aaKnown RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 ARHGEF7Q14155 803 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 BNC2Q6ZN30 1099 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 APLFQ8IW19 511 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 USP13Q92995 863 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 FBXO32Q969P5 355 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 BRD8Q9H0E9 1235 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 SCHIP1Q9P0W5 487 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 RICTORQ6R327 1708 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 RBAK-RBAKDNI3L0D1 243 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 FCHO1O14526 889 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 TRDMT1O14717 391 aaKnown RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 PLSCR1O15162 318 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 UPP2O95045 317 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 FSBPO95073 299 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 NUDT17P0C025 328 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 SLURP2P0DP57 97 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 AMPD1P23109 780 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 AVPR1AP37288 418 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 ALDH1A3P47895 512 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 DPYSL3Q14195 570 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 CNGA2Q16280 664 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 WASHC2DQ5SRD0 308 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 UGT3A1Q6NUS8 523 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 YTHDF3Q7Z739 585 aaKnown RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 RNF180Q86T96 592 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 C12orf56Q8IXR9 622 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 ANKRD27Q96NW4 1050 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 CCT7Q99832 543 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 THAP1Q9NVV9 213 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 DDX43Q9NXZ2 648 aaKnown RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 ACTL7BQ9Y614 415 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 MRC1P22897 1456 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 H0Y626 953 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 TRIM16O95361 564 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 CRYMQ14894 314 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 TTLL9Q3SXZ7 439 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 PAN2Q504Q3 1202 aaKnown RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 WLSQ5T9L3 541 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 N4BP2L1Q5TBK1 243 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 ZNF410Q86VK4 478 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 CKAP2Q8WWK9 683 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 CYGBQ8WWM9 190 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 JADE3Q92613 823 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 DACH2Q96NX9 599 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 RBBP8Q99708 897 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 ASCC2Q9H1I8 757 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 ABHD16BQ9H3Z7 469 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 RBM22Q9NW64 420 aaKnown RBP eCLIP11.62□□□□□ -0.55
RPGR-203ENST00000378505 IRAK4Q9NWZ3 460 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 CYP39A1Q9NYL5 469 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 GGA2Q9UJY4 613 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 E5RJQ4 531 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 F5H5T6 163 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 FSCN2O14926 492 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 LYPLA2O95372 231 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 ZSCAN5DPP0CG00 497 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 MARCKSL1P49006 195 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 RTP1P59025 263 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 IRX1P78414 480 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 ADIGQ0VDE8 80 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 FAAP100Q0VG06 881 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 CDH17Q12864 832 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 CYLC2Q14093 348 aaPredicted RBP11.62□□□□□ -0.55
RPGR-203ENST00000378505 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.62□□□□□ -0.55
RPGR-203ENST00000378505 RRM2BQ7LG56 351 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 OPTNQ96CV9 577 aa11.62□□□□□ -0.55
RPGR-203ENST00000378505 SH3BP1Q9Y3L3 701 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms