RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 SHOC2Q9UQ13 582 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 SCN1AP35498 2009 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 A0A1W2PPM1 405 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 ADCY6O43306 1168 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 MAP3K7O43318 606 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 GPX6P59796 221 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 RBP5P82980 135 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 CTC1Q2NKJ3 1217 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 SLC45A4Q5BKX6 768 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 PPFIBP2Q8ND30 876 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 MS4A4AQ96JQ5 239 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 WDR83Q9BRX9 315 aaKnown RBP17.81■□□□□ 0.44
TRIM27-201ENST00000377194 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 CYLDQ9NQC7 956 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 NME7Q9Y5B8 376 aa17.81■□□□□ 0.44
TRIM27-201ENST00000377194 BTBD19C9JJ37 291 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 LYNP07948 512 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 P4HA1P13674 534 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 CCNFP41002 786 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 RGS7P49802 495 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 ZNF143P52747 638 aaPredicted RBP17.8■□□□□ 0.44
TRIM27-201ENST00000377194 NPNTQ6UXI9 565 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 FAM183BPQ6ZVS7 135 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 RFX6Q8HWS3 928 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 FAM71DQ8N9W8 422 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 RFWD2Q8NHY2 731 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 RXFP2Q8WXD0 754 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 ZNF75CPQ92670 426 aaPredicted RBP17.8■□□□□ 0.44
TRIM27-201ENST00000377194 STMN2Q93045 179 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 SPON1Q9HCB6 807 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 SETD4Q9NVD3 440 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 LNPEPQ9UIQ6 1025 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 ITGA11Q9UKX5 1188 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 RPL26L1Q9UNX3 145 aaKnown RBP17.8■□□□□ 0.44
TRIM27-201ENST00000377194 CITO14578 2027 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 C2CD4BA6NLJ0 364 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 C2CD2LO14523 706 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 HOXA11P31270 313 aaPredicted RBP17.8■□□□□ 0.44
TRIM27-201ENST00000377194 CCNA1P78396 465 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 NR1H3Q13133 447 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 CDO1Q16878 200 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 SMYD5Q6GMV2 418 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 OR6B2Q6IFH4 312 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 LCLAT1Q6UWP7 414 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 CENPUQ71F23 418 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 NAT8LQ8N9F0 302 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 MCUR1Q96AQ8 359 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 MRPL45Q9BRJ2 306 aaKnown RBP17.8■□□□□ 0.44
TRIM27-201ENST00000377194 C12orf65Q9H3J6 166 aaKnown RBP17.8■□□□□ 0.44
TRIM27-201ENST00000377194 CDHR5Q9HBB8 845 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 HES2Q9Y543 173 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 CLUHO75153 1309 aa17.8■□□□□ 0.44
TRIM27-201ENST00000377194 GYG2O15488 501 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 GSC2O15499 205 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 PDGFRAP16234 1089 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 SSTR1P30872 391 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 THOC5Q13769 683 aaKnown RBP17.79■□□□□ 0.44
TRIM27-201ENST00000377194 HIF1AQ16665 826 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 PPP1R26Q5T8A7 1209 aaPredicted RBP17.79■□□□□ 0.44
TRIM27-201ENST00000377194 PMF1Q6P1K2 205 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 LVRNQ6Q4G3 990 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 VPS52Q8N1B4 723 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 TTC13Q8NBP0 860 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 RSAD2Q8WXG1 361 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 TTC25Q96NG3 672 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 ZNF184Q99676 751 aaPredicted RBP17.79■□□□□ 0.44
TRIM27-201ENST00000377194 NT5C1AQ9BXI3 368 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
TRIM27-201ENST00000377194 ZSWIM8A7E2V4 1837 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 DNAH12Q6ZR08 3092 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 A0A0G2JND7 137 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 APOC4-APOC2K7ER74 178 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 APOC2P02655 101 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 RBP3P10745 1247 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 AMPD1P23109 780 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 AP1B1Q10567 949 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 MYBPC3Q14896 1274 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 RINLQ6ZS11 566 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 CEP128Q6ZU80 1094 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 SPATA18Q8TC71 538 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 LPIN3Q9BQK8 851 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 SYT17Q9BSW7 474 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 SPATA16Q9BXB7 569 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 ALG13Q9NP73 1137 aaKnown RBP17.79■□□□□ 0.44
TRIM27-201ENST00000377194 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRIM27-201ENST00000377194 DNAAF2Q9NVR5 837 aaKnown RBP17.79■□□□□ 0.44
TRIM27-201ENST00000377194 ASNSD1Q9NWL6 643 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 GALNT8Q9NY28 637 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 SNTG2Q9NY99 539 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 PDP2Q9P2J9 529 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 KANSL3Q9P2N6 904 aa17.79■□□□□ 0.44
TRIM27-201ENST00000377194 COL1A2P08123 1366 aa17.78■□□□□ 0.44
TRIM27-201ENST00000377194 KAT6AQ92794 2004 aa17.78■□□□□ 0.44
TRIM27-201ENST00000377194 TMEM63AO94886 807 aa17.78■□□□□ 0.44
TRIM27-201ENST00000377194 ENDOD1O94919 500 aa17.78■□□□□ 0.44
TRIM27-201ENST00000377194 MMP3P08254 477 aa17.78■□□□□ 0.44
TRIM27-201ENST00000377194 EIF3EP60228 445 aaKnown RBP17.78■□□□□ 0.44
TRIM27-201ENST00000377194 ACOT1Q86TX2 421 aa17.78■□□□□ 0.44
TRIM27-201ENST00000377194 PPIL6Q8IXY8 311 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms