RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 LINC00854A0A1B0GVQ3 168 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 GAS2O43903 313 aaKnown RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 KLHL2O95198 593 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 SERPINB8P50452 374 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 RPS7P62081 194 aaKnown RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 ANGPT1Q15389 498 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 FSCN1Q16658 493 aaKnown RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 ZNF284Q2VY69 593 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 POU1F1P28069 291 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 CCL23P55773 120 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 ERVK-9P63128 1117 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 PRKCQQ04759 706 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 TIGD7Q6NT04 549 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 CENPLQ8N0S6 344 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 SYN2Q92777 582 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 PAFAH2Q99487 392 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 RBM22Q9NW64 420 aaKnown RBP eCLIP17.66■□□□□ 0.422e-10■■■□□ 16.2
MCF2L-203ENST00000375604 EVPLLA8MZ36 301 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 GLP2RO95838 553 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 ERVK-10P10266 1014 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 IFNLR1Q8IU57 520 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 STX19Q8N4C7 294 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 CATSPER2Q96P56 530 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 ACP6Q9NPH0 428 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 SAE1Q9UBE0 346 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 ZNF682O95780 498 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 GARTP22102 1010 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 BOP1Q14137 746 aaKnown RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 C4orf19Q8IY42 314 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 TDRD5Q8NAT2 981 aaKnown RBP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
MCF2L-203ENST00000375604 RNF208Q9H0X6 261 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 GPAMQ9HCL2 828 aa17.66■□□□□ 0.42
MCF2L-203ENST00000375604 KCNA3P22001 575 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 TBX4P57082 545 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 DNAL1Q4LDG9 190 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 CDY2AQ9Y6F7 541 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 CDY1Q9Y6F8 540 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 MGAT1P26572 445 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 ABCG1P45844 678 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 CENPPQ6IPU0 288 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 NPNTQ6UXI9 565 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 FHDC1Q9C0D6 1143 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-203ENST00000375604 VANGL2Q9ULK5 521 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 PSEN2P49810 448 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 OLFML2BQ68BL8 750 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 KRT87PA6NCN2 255 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 VEGFAP15692 232 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-203ENST00000375604 FNDC3BQ53EP0 1204 aaKnown RBP17.65■□□□□ 0.42
MCF2L-203ENST00000375604 PLEKHM3Q6ZWE6 761 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 PRUNE1Q86TP1 453 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 GLIS3Q8NEA6 775 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 SLC16A10Q8TF71 515 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 TSEN34Q9BSV6 310 aaKnown RBP17.65■□□□□ 0.42
MCF2L-203ENST00000375604 ILKAPQ9H0C8 392 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-203ENST00000375604 MUTP22033 750 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 GSSP48637 474 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 KCNMA1Q12791 1236 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 GJC2Q5T442 439 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-203ENST00000375604 CACHD1Q5VU97 1274 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 SDHAF4Q5VUM1 108 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 OTOP1Q7RTM1 612 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 SIX5Q8N196 739 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 SGSM3Q96HU1 749 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 RIOX1Q9H6W3 641 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 ARHGAP20Q9P2F6 1191 aa17.65■□□□□ 0.42
MCF2L-203ENST00000375604 USP12O75317 370 aa17.64■□□□□ 0.42
MCF2L-203ENST00000375604 RASSF9O75901 435 aa17.64■□□□□ 0.42
MCF2L-203ENST00000375604 ILDR2Q71H61 639 aa17.64■□□□□ 0.42
MCF2L-203ENST00000375604 CDC42EP4Q9H3Q1 356 aaKnown RBP17.64■□□□□ 0.42
MCF2L-203ENST00000375604 EFCAB14O75071 495 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 MED21Q13503 144 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 PDK2Q15119 407 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 DYRK1BQ9Y463 629 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 GAKO14976 1311 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 ZSCAN5CA6NGD5 496 aaPredicted RBP17.64■□□□□ 0.41
MCF2L-203ENST00000375604 DAB2IPQ5VWQ8 1189 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 ITGA11Q9UKX5 1188 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 APOBEC3HQ6NTF7 200 aaKnown RBP17.64■□□□□ 0.41
MCF2L-203ENST00000375604 PTF1AQ7RTS3 328 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 APPL1Q9UKG1 709 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 PCDHB5Q9Y5E4 795 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 SPATA31D3P0C874 917 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 ETS1P14921 441 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 AQP5P55064 265 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 CXCL17Q6UXB2 119 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 SPATA31D4Q6ZUB0 917 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 MMGT1Q8N4V1 131 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 DNERQ8NFT8 737 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 ADAM2Q99965 735 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 ZDHHC6Q9H6R6 413 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 KBTBD4Q9NVX7 518 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 DCDC2Q9UHG0 476 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 NRXN1Q9ULB1 1477 aa17.64■□□□□ 0.41
MCF2L-203ENST00000375604 AP5Z1O43299 807 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 MSH3P20585 1137 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 TTLL9Q3SXZ7 439 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms