RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 NPNTQ6UXI9 565 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 RGS9BPQ6ZS82 235 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 ZBTB46Q86UZ6 589 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 ZFP28Q8NHY6 868 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 TLE6Q9H808 572 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 KANSL3Q9P2N6 904 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 SLC24A2Q9UI40 661 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 APPL1Q9UKG1 709 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 CNTNAP2Q9UHC6 1331 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 COL2A1P02458 1487 aaPredicted RBP16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 MAGEB2O15479 319 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 TMEM63AO94886 807 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 ITGAVP06756 1048 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 RBP3P10745 1247 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 TGFB2P61812 414 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 HADHQ16836 314 aaKnown RBP16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 FAXCQ5TGI0 409 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 FKBP1CQ5VVH2 108 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 TDRPQ86YL5 185 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 OR6Y1Q8NGX8 325 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 GIPC3Q8TF64 312 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 CFAP36Q96G28 342 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 ARPC5LQ9BPX5 153 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 SMYD3Q9H7B4 428 aa16.56■□□□□ 0.24
SYNCRIP-202ENST00000369622 TRAFD1O14545 582 aaPredicted RBP16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 ASS1P00966 412 aaKnown RBP16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 MMRN1Q13201 1228 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 CAPSQ13938 189 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 C16orf72Q14CZ0 275 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 PTPN20Q4JDL3 420 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 DARS2Q6PI48 645 aaKnown RBP16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 KIAA0319LQ8IZA0 1049 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 METTL25Q8N6Q8 603 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 GCNAQ96QF7 691 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 PANX3Q96QZ0 392 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 PPP1R16BQ96T49 567 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 TSSK1BQ9BXA7 367 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 TRIM55Q9BYV6 548 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 DDX56Q9NY93 547 aaKnown RBP16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 LRCH4O75427 683 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 GRAP2O75791 330 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 ZWINTO95229 277 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 INHBAP08476 426 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 BGNP21810 368 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 RXRBP28702 533 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 ELK3P41970 407 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 PDK3Q15120 406 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 DUOXA2Q1HG44 320 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 SMUG1Q53HV7 270 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 EFCAB3Q8N7B9 438 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 SPATA18Q8TC71 538 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 CDHR1Q96JP9 859 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 CENPOQ9BU64 300 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 NIF3L1Q9GZT8 377 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 LZTS1Q9Y250 596 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 GJA3Q9Y6H8 435 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 LOXHD1Q8IVV2 1947 aa16.55■□□□□ 0.24
SYNCRIP-202ENST00000369622 PLSCR1O15162 318 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 FAM155BO75949 473 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 GJB1P08034 283 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 PEX2P28328 305 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 BACE1P56817 501 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 CD300CQ08708 224 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 TBL3Q12788 808 aaKnown RBP16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 PTK7Q13308 1070 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 GRAMD1BQ3KR37 738 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 CCDC62Q6P9F0 684 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 IFNLR1Q8IU57 520 aaPredicted RBP16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 IGDCC3Q8IVU1 814 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 RNF149Q8NC42 400 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 SLC35B2Q8TB61 432 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 NKD2Q969F2 451 aaPredicted RBP16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 MEI4A8MW99 385 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 H3BSA7 217 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 H7C0C1 242 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 CSDE1O75534 798 aaKnown RBP16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 TRPA1O75762 1119 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 KITP10721 976 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 ATP5OP48047 213 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 MYLK3Q32MK0 819 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 EFHC2Q5JST6 749 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 ACAD11Q709F0 780 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 FNDC8Q8TC99 324 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 CCDC124Q96CT7 223 aaKnown RBP16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 SLC13A1Q9BZW2 595 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 IL1RAPL1Q9NZN1 696 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 PGAP2Q9UHJ9 254 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 MYH9P35579 1960 aaKnown RBP16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 CLPTM1O96005 669 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 VCLP18206 1134 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 KDELR1P24390 212 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 GHRHRQ02643 423 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 GK3PQ14409 553 aa16.54■□□□□ 0.24
SYNCRIP-202ENST00000369622 SLC45A4Q5BKX6 768 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms