RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 BLOC1S4Q9NUP1 217 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 WDR35Q9P2L0 1181 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 TEX51A0A1B0GUA7 166 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 CAPN8A6NHC0 703 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 ARHGAP6O43182 974 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 WARSP23381 471 aaKnown RBP16.79■□□□□ 0.28
DDX55-202ENST00000354291 DGKGP49619 791 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 AFF3P51826 1226 aaKnown RBP16.79■□□□□ 0.28
DDX55-202ENST00000354291 GRIN1Q05586 938 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 TAF1BQ53T94 588 aaPredicted RBP16.79■□□□□ 0.28
DDX55-202ENST00000354291 ZNF720Q7Z2F6 126 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 FAM124AQ86V42 546 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 CACUL1Q86Y37 369 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 TMPRSS6Q8IU80 811 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 PDZD8Q8NEN9 1154 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 C1orf216Q8TAB5 229 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 BAP1Q92560 729 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
DDX55-202ENST00000354291 INTS4Q96HW7 963 aaKnown RBP16.79■□□□□ 0.28
DDX55-202ENST00000354291 ZNF518BQ9C0D4 1074 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 CLMPQ9H6B4 373 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 TMEM30AQ9NV96 361 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 FTSJ1Q9UET6 329 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 ANKRD6Q9Y2G4 727 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 SLCO1B1Q9Y6L6 691 aa16.79■□□□□ 0.28
DDX55-202ENST00000354291 CLDN5O00501 218 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 CACNG3O60359 315 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 SYNCRIPO60506 623 aaKnown RBP16.78■□□□□ 0.28
DDX55-202ENST00000354291 RTN3O95197 1032 aaPredicted RBP16.78■□□□□ 0.28
DDX55-202ENST00000354291 ACADMP11310 421 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 SYT1P21579 422 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 HNF1BP35680 557 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 CXADRP78310 365 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 IL9RQ01113 521 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 KCNA1Q09470 495 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 TEAD4Q15561 434 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 PCSK4Q6UW60 755 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 LIMS2Q7Z4I7 341 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 OR6B3Q8NGW1 331 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 SCAMP5Q8TAC9 235 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 PRCCQ92733 491 aaPredicted RBP16.78■□□□□ 0.28
DDX55-202ENST00000354291 ANKRD36BP1Q96IX9 119 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 MRPL45Q9BRJ2 306 aaKnown RBP16.78■□□□□ 0.28
DDX55-202ENST00000354291 BACH2Q9BYV9 841 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 ST6GALNAC4Q9H4F1 302 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
DDX55-202ENST00000354291 LDHAP00338 332 aaKnown RBP16.77■□□□□ 0.28
DDX55-202ENST00000354291 CISD3P0C7P0 127 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 PTPN1P18031 435 aaKnown RBP16.77■□□□□ 0.28
DDX55-202ENST00000354291 KCNC4Q03721 635 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 CCDC173Q0VFZ6 552 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 TARDBPQ13148 414 aaKnown RBP eCLIP16.77■□□□□ 0.28
DDX55-202ENST00000354291 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.28
DDX55-202ENST00000354291 OVCA2Q8WZ82 227 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 EPSTI1Q96J88 318 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 ELOVL4Q9GZR5 314 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 PCIF1Q9H4Z3 704 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 PLK2Q9NYY3 685 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 EXOC7Q9UPT5 735 aa16.77■□□□□ 0.28
DDX55-202ENST00000354291 SRPRBQ9Y5M8 271 aaKnown RBP16.77■□□□□ 0.28
DDX55-202ENST00000354291 H0Y8X5 98 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 TNNC2P02585 160 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 TXLNAP40222 546 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 CCT8P50990 548 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 LAYNQ6UX15 382 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 OR5B17Q8NGF7 314 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 IGSF8Q969P0 613 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 ACCSQ96QU6 501 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 KCNK16Q96T55 309 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 DUSP9Q99956 384 aaKnown RBP16.76■□□□□ 0.27
DDX55-202ENST00000354291 B3GNT5Q9BYG0 378 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 DPEP3Q9H4B8 488 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 MRPL44Q9H9J2 332 aaKnown RBP16.76■□□□□ 0.27
DDX55-202ENST00000354291 STK17AQ9UEE5 414 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 PIEZO2Q9H5I5 2752 aa16.76■□□□□ 0.27
DDX55-202ENST00000354291 PCDHGA12O60330 932 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 TBX18O95935 607 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 IL12RB1P42701 662 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 INAVAQ3KP66 663 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 DYMQ7RTS9 669 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 SYCP3Q8IZU3 236 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 FGF11Q92914 225 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 HVCN1Q96D96 273 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 ZSCAN16Q9H4T2 348 aaPredicted RBP16.75■□□□□ 0.27
DDX55-202ENST00000354291 C6orf106Q9H6K1 298 aaPredicted RBP16.75■□□□□ 0.27
DDX55-202ENST00000354291 TM9SF3Q9HD45 589 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.75■□□□□ 0.279e-7■■■■■ 144.6
DDX55-202ENST00000354291 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 FBXO2Q9UK22 296 aaPredicted RBP16.75■□□□□ 0.27
DDX55-202ENST00000354291 NME7Q9Y5B8 376 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 COL6A6A6NMZ7 2263 aa16.75■□□□□ 0.27
DDX55-202ENST00000354291 PTPRJQ12913 1337 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 COL12A1Q99715 3063 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 CBX4O00257 560 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 ENC1O14682 589 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms