RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 RAD9BQ6WBX8 426 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 ATXN2LQ8WWM7 1075 aaKnown RBP12.11□□□□□ -0.47
SCN5A-202ENST00000333535 PPP1R10Q96QC0 940 aaKnown RBP12.11□□□□□ -0.47
SCN5A-202ENST00000333535 SYNDIG1Q9H7V2 258 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 AHSPQ9NZD4 102 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 MAPRE3Q9UPY8 281 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 SHOC2Q9UQ13 582 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 C17orf102A2RUQ5 167 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 HPGDP15428 266 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 NAA20P61599 178 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 GPRASP2Q96D09 838 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 NUDT12Q9BQG2 462 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 AGPAT3Q9NRZ7 376 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 H3BMM5 538 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 BRINP3Q76B58 766 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 MYO1HQ8N1T3 1032 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 HACL1Q9UJ83 578 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 SUPT7LO94864 414 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 R3HDM1Q15032 1099 aaKnown RBP12.11□□□□□ -0.47
SCN5A-202ENST00000333535 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 STRA8Q7Z7C7 330 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCN5A-202ENST00000333535 AVENQ9NQS1 362 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-202ENST00000333535 VANGL2Q9ULK5 521 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 AFF2P51816 1311 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 CDK7P50613 346 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
SCN5A-202ENST00000333535 PDPK2PQ6A1A2 396 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 OR2W6PQ8NHA6 318 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 RAD21L1Q9H4I0 556 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 PNPLA6Q8IY17 1366 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 PDE4DIPQ5VU43 2346 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 PRR23AA6NEV1 266 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 MEI4A8MW99 385 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 KLRC1P26715 233 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-202ENST00000333535 ERAP2Q6P179 960 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 SLC26A11Q86WA9 606 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 ULK2Q8IYT8 1036 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 TBC1D13Q9NVG8 400 aa12.11□□□□□ -0.47
SCN5A-202ENST00000333535 TBC1D12O60347 775 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 PTENP60484 403 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 PDIA6Q15084 440 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 CCNG2Q16589 344 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 DGUOKQ16854 277 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 CDC73Q6P1J9 531 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 DPF2Q92785 391 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 TMEM169Q96HH4 297 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 CYP39A1Q9NYL5 469 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 E9PBE3 544 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 IRF1P10914 325 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 TGFBR2P37173 567 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ZDHHC17Q8IUH5 632 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 LRRC49Q8IUZ0 686 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 LRRC34Q8IZ02 419 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 VCPIP1Q96JH7 1222 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 FUT8Q9BYC5 575 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ICAM1P05362 532 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ABCB1P08183 1280 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-202ENST00000333535 EPHB2P29323 1055 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 SEC24CP53992 1094 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 PMF1Q6P1K2 205 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ATG16L2Q8NAA4 619 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 C15orf38-AP3S2A0A0A6YYH1 394 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 GRAP2O75791 330 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ATP6V1G2O95670 118 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 RPN2P04844 631 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 CYP4A22Q5TCH4 519 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ARPINQ7Z6K5 226 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 AADATQ8N5Z0 425 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 EIF1ADQ8N9N8 165 aaKnown RBP12.1□□□□□ -0.47
SCN5A-202ENST00000333535 FAM151AQ8WW52 585 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 RORBQ92753 470 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 RNFT2Q96EX2 444 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 PCDH9Q9HC56 1237 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 STON1Q9Y6Q2 735 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ITGB3P05106 788 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 MZF1P28698 734 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-202ENST00000333535 CSE1LP55060 971 aaKnown RBP12.1□□□□□ -0.47
SCN5A-202ENST00000333535 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
SCN5A-202ENST00000333535 SMAD1Q15797 465 aaKnown RBP12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ITIH5Q86UX2 942 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 TBC1D16Q8TBP0 767 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 MDM1Q8TC05 714 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 PACSIN1Q9BY11 444 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 CD248Q9HCU0 757 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 MIEF1Q9NQG6 463 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 TRPM5Q9NZQ8 1165 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 MYRFQ9Y2G1 1151 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 CYP2C9P11712 490 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 ATP6V1B2P21281 511 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 SLC1A6P48664 564 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 STX4Q12846 297 aa12.1□□□□□ -0.47
SCN5A-202ENST00000333535 TRAF2Q12933 501 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms