RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SERPINB9P50453 376 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 YWHAZP63104 245 aaKnown RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 STAT4Q14765 748 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 NAT16Q8N8M0 369 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 APOL2Q9BQE5 337 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 RUBCNLQ9H714 662 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 CDH9Q9ULB4 789 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 VPS26AO75436 327 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 PSMD10O75832 226 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 POLR2LP62875 67 aaKnown RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 SERPINA13PQ6UXR4 307 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 MSL3Q8N5Y2 521 aaKnown RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 SPATA4Q8NEY3 305 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 TGS1Q96RS0 853 aaKnown RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 TCF25Q9BQ70 676 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 CLASP2O75122 1294 aaKnown RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 GYPCP04921 128 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 OR1D2P34982 312 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ATAT1Q5SQI0 421 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ELOA2Q8IYF1 753 aaPredicted RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 TTPALQ9BTX7 342 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 TNFSF13BQ9Y275 285 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 F8VZ95 297 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 PLA2G6O60733 806 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ITGB6P18564 788 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 KCNJ1P48048 391 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 PTK7Q13308 1070 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 TP53BP2Q13625 1128 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 LRRC14Q15048 493 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ZSCAN26Q16670 478 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 TPCN2Q8NHX9 752 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 SLC20A1Q8WUM9 679 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 MYLPFQ96A32 169 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 AASDHPPTQ9NRN7 309 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 RPTORQ8N122 1335 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 FZD9O00144 591 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 GPR25O00155 361 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 LUC7L3O95232 432 aaKnown RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 PLEKP08567 350 aaPredicted RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 NCALDP61601 193 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 SDHAF4Q5VUM1 108 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 FOXR1Q6PIV2 292 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 MYO1HQ8N1T3 1032 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 NR1H4Q96RI1 486 aaPredicted RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ERGIC2Q96RQ1 377 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 PTPN7P35236 360 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 DDX42Q86XP3 938 aaKnown RBP eCLIP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ZNF557Q8N988 423 aaPredicted RBP11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 TBC1D13Q9NVG8 400 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 TEKT2Q9UIF3 430 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ARHGAP26Q9UNA1 814 aa11.04□□□□□ -0.64
SYNPO2-201ENST00000307142 ATP9AO75110 1047 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 SOAT2O75908 522 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 ALOX15P16050 662 aaPredicted RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 GABRR2P28476 465 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 DDR2Q16832 855 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 TMCO5AQ8N6Q1 288 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 UTP6Q9NYH9 597 aaKnown RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 ZFP69BQ9UJL9 534 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 PSMD12O00232 456 aaPredicted RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 ADH1CP00326 375 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 SERPINF2P08697 491 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 RRM1P23921 792 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 GLUD2P49448 558 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 DDX39BQ13838 428 aaKnown RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 CCL14Q16627 93 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 POPDC2Q9HBU9 364 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 FGF19O95750 216 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 IL1BP01584 269 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 SMPD1P17405 629 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 ATP6V1E1P36543 226 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 LBX2Q6XYB7 198 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 SLC24A5Q71RS6 500 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 MAP4K3Q8IVH8 894 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 TAGAPQ8N103 731 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 B3GALNT2Q8NCR0 500 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 FLCNQ8NFG4 579 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 ZNF606Q8WXB4 792 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 GPR20Q99678 358 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 DOT1LQ8TEK3 1739 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 ANGPT2O15123 496 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 GLP2RO95838 553 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 LTFP02788 710 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 FAM83EQ2M2I3 478 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 FAM124AQ86V42 546 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 ARHGEF19Q8IW93 802 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 DEFB106AQ8N104 65 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 CPA6Q8N4T0 437 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 NXF3Q9H4D5 531 aaKnown RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 PADI3Q9ULW8 664 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 RPS6KL1Q9Y6S9 549 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 CCDC88AQ3V6T2 1871 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 ITGA8P53708 1063 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 CAPSQ13938 189 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 HSDL1Q3SXM5 330 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 BEND6Q5SZJ8 279 aaPredicted RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 LRRC8EQ6NSJ5 796 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms