RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 H0YC42 278 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CTDNEP1O95476 244 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ZCCHC18P0CG32 403 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MLH1P40692 756 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 PIK3CGP48736 1102 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 GPR162Q16538 588 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 RSBN1Q5VWQ0 802 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 SDE2Q6IQ49 451 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 RORBQ92753 470 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MIEF2Q96C03 454 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CRAMP1Q96RY5 1269 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ADGRE3Q9BY15 652 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 SPRTNQ9H040 489 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 RGS18Q9NS28 235 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 PIM2Q9P1W9 311 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CORO2BQ9UQ03 480 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 PLEKP08567 350 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 TSHRP16473 764 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 VCLP18206 1134 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CHN2P52757 468 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 NFYCQ13952 458 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 FRG1Q14331 258 aaKnown RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ZRANB3Q5FWF4 1079 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 LMBRD2Q68DH5 695 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 TTC27Q6P3X3 843 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 C11orf88Q6PI97 169 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 SPATA17Q96L03 361 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 DAPK2Q9UIK4 370 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 COMMD3-BMI1R4GMX3 469 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 NRXN1Q9ULB1 1477 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 SSTR3P32745 418 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 SKIV2L2P42285 1042 aaKnown RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 NFIAQ12857 509 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 NEK10Q6ZWH5 1172 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 KRT74Q7RTS7 529 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 OTOAQ7RTW8 1153 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 SLFN11Q7Z7L1 901 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 WDR49Q8IV35 697 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MAGEB10Q96LZ2 347 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 A0A087X0T9 212 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 BTNL10A8MVZ5 291 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 H3BQF6 201 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 FAM228BP0C875 321 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 RAG1P15918 1043 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 MICALL2Q8IY33 904 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SLITRK1Q96PX8 696 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TIMMDC1Q9NPL8 285 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SCUBE2Q9NQ36 999 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 DNAJC16Q9Y2G8 782 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 PROSCO94903 275 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SLC25A27O95847 323 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 NCAM1P13591 858 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 MSH3P20585 1137 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 HPCAL1P37235 193 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 IFNGR2P38484 337 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 CDK16Q00536 496 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 MTMR2Q13614 643 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 CYP4A22Q5TCH4 519 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 IL31Q6EBC2 164 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ZNF662Q6ZS27 426 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 MIER2Q8N344 545 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 UBXN6Q9BZV1 441 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 RUVBL2Q9Y230 463 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 LTN1O94822 1766 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 CBFA2T3O75081 653 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 HOXC6P09630 235 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 CPA3P15088 417 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 STAT5AP42229 794 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TAF6P49848 677 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 RENBPP51606 427 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TSEN34Q9BSV6 310 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 CPVLQ9H3G5 476 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TUBA8Q9NY65 449 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 POLIQ9UNA4 740 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ACOT9Q9Y305 439 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 HBP1O60381 514 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 VDRP11473 427 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ALOX15P16050 662 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TFE3P19532 575 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ACAT1P24752 427 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TRAF2Q12933 501 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ANGPT1Q15389 498 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 DGKDQ16760 1214 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TMEM132CQ8N3T6 1108 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TMEM143Q96AN5 459 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 MYL4P12829 197 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TBCELQ5QJ74 424 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 PMF1Q6P1K2 205 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SLC25A23Q9BV35 468 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 PEX1O43933 1283 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 LDLRP01130 860 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 KRT6AP02538 564 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 TGFBR2P37173 567 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 OTUD4Q01804 1114 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 PRKCQQ04759 706 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SNX30Q5VWJ9 437 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 ZCCHC7Q8N3Z6 543 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 SRP68Q9UHB9 627 aaKnown RBP7.85□□□□□ -1.15
SF3B3-201ENST00000302516 CAPN6Q9Y6Q1 641 aa7.85□□□□□ -1.15
SF3B3-201ENST00000302516 H7C4K7 107 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms