RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 TAF5Q15542 800 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 LY6G5CQ5SRR4 150 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 FSTL4Q6MZW2 842 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 KLHDC10Q6PID8 442 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 C12orf40Q86WS4 652 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 TMEM25Q86YD3 366 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 NEK11Q8NG66 645 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 DDX1Q92499 740 aaKnown RBP19.08■□□□□ 0.64
SPSB3-201ENST00000301717 CLDN23Q96B33 292 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 P2RY11Q96G91 374 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 ERGIC2Q96RQ1 377 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 FAM86C1Q9NVL1 165 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 MARCH2Q9P0N8 246 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 PCDHGC3Q9UN70 934 aa19.08■□□□□ 0.64
SPSB3-201ENST00000301717 NFATC1O95644 943 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 FYNP06241 537 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 HOXC13P31276 330 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 KRT9P35527 623 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 GALK1P51570 392 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 MLLT6P55198 1093 aaPredicted RBP19.07■□□□□ 0.64
SPSB3-201ENST00000301717 FMNL3Q8IVF7 1028 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 SFTPA1Q8IWL2 248 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 EPS8L1Q8TE68 723 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 EZH1Q92800 747 aaPredicted RBP19.07■□□□□ 0.64
SPSB3-201ENST00000301717 OSBPL6Q9BZF3 934 aa19.07■□□□□ 0.64
SPSB3-201ENST00000301717 EGFP01133 1207 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 LTFP02788 710 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 ERBB2P04626 1255 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 MMEP08473 750 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 OPRD1P41143 372 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 SLC6A11P48066 632 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 MTAPQ13126 283 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 MEA1Q16626 185 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 PTPN20Q4JDL3 420 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 C2CD6Q53TS8 623 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 Q6ZNB5 142 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 HTR3DQ70Z44 454 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 TMEM110Q86TL2 294 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 SCML4Q8N228 414 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 ZNF276Q8N554 614 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 RNF139Q8WU17 664 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 BHMTQ93088 406 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 FAM149B1Q96BN6 582 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 NELL2Q99435 816 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 ABCC13Q9NSE7 274 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 POLR3BQ9NW08 1133 aaPredicted RBP19.06■□□□□ 0.64
SPSB3-201ENST00000301717 SPATA6Q9NWH7 488 aaPredicted RBP19.06■□□□□ 0.64
SPSB3-201ENST00000301717 C2orf42Q9NWW7 574 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 NAALADL1Q9UQQ1 740 aa19.06■□□□□ 0.64
SPSB3-201ENST00000301717 SLC9A3R1O14745 358 aaPredicted RBP19.05■□□□□ 0.64
SPSB3-201ENST00000301717 CORO1AP31146 461 aaKnown RBP19.05■□□□□ 0.64
SPSB3-201ENST00000301717 SOX5P35711 763 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 ARID5AQ03989 594 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 CCINQ13939 588 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 TMEM196Q5HYL7 178 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 PKN3Q6P5Z2 889 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 TPGS1Q6ZTW0 290 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 TADA2BQ86TJ2 420 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 MAML2Q8IZL2 1156 aaPredicted RBP19.05■□□□□ 0.64
SPSB3-201ENST00000301717 NAT16Q8N8M0 369 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 ADAM32Q8TC27 787 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 STK32AQ8WU08 396 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 IRGQQ8WZA9 623 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 MSANTD3Q96H12 275 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 PPP1R13BQ96KQ4 1090 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 SPAG5Q96R06 1193 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 CDK5RAP1Q96SZ6 601 aaKnown RBP19.05■□□□□ 0.64
SPSB3-201ENST00000301717 P2RY13Q9BPV8 354 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 PDCL3Q9H2J4 239 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 NOCTQ9UK39 431 aaKnown RBP19.05■□□□□ 0.64
SPSB3-201ENST00000301717 STRIP2Q9ULQ0 834 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 MIA3Q5JRA6 1907 aa19.05■□□□□ 0.64
SPSB3-201ENST00000301717 A0A1B0GTH6 734 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 TRIM24O15164 1050 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 GRAP2O75791 330 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 FBXO21O94952 628 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 ADH5P11766 374 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 CHRNB2P17787 502 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 ACADSBP45954 432 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 BPIFB4P59827 614 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 PITX1P78337 314 aaPredicted RBP19.04■□□□□ 0.64
SPSB3-201ENST00000301717 ANGPT1Q15389 498 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 SYPL2Q5VXT5 272 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 TSSK4Q6SA08 328 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 FAM183BPQ6ZVS7 135 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 DENND1CQ8IV53 801 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 PHOX2BQ99453 314 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 LHX5Q9H2C1 402 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 TBC1D14Q9P2M4 693 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 LSM7Q9UK45 103 aaKnown RBP19.04■□□□□ 0.64
SPSB3-201ENST00000301717 VPS13AQ96RL7 3174 aa19.04■□□□□ 0.64
SPSB3-201ENST00000301717 CACNA1IQ9P0X4 2223 aa19.03■□□□□ 0.64
SPSB3-201ENST00000301717 TRDMT1O14717 391 aaKnown RBP19.03■□□□□ 0.64
SPSB3-201ENST00000301717 NCAM2O15394 837 aa19.03■□□□□ 0.64
SPSB3-201ENST00000301717 SERPINC1P01008 464 aa19.03■□□□□ 0.64
SPSB3-201ENST00000301717 NCAM1P13591 858 aa19.03■□□□□ 0.64
SPSB3-201ENST00000301717 STAT1P42224 750 aa19.03■□□□□ 0.64
SPSB3-201ENST00000301717 COG7P83436 770 aa19.03■□□□□ 0.64
SPSB3-201ENST00000301717 FANCCQ00597 558 aa19.03■□□□□ 0.64
SPSB3-201ENST00000301717 GOLGA8FQ08AF8 430 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms