RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TMEM30AQ9NV96 361 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 DZANK1Q9NVP4 752 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 DNAH12Q6ZR08 3092 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 F8VP50 259 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CNPP09543 421 aaKnown RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 ATF6P18850 670 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 PCK1P35558 622 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 PBX2P40425 430 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ACBD5Q5T8D3 534 aaPredicted RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 FAM102AQ5T9C2 384 aaPredicted RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 MEI1Q5TIA1 1274 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 TMEM184AQ6ZMB5 413 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CMASQ8NFW8 434 aaPredicted RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 DDX23Q9BUQ8 820 aaKnown RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 SLC28A3Q9HAS3 691 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ABCC13Q9NSE7 274 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ZDHHC7Q9NXF8 308 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 HELZP42694 1942 aaKnown RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 TULP2O00295 520 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ADAM12O43184 909 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 TGM5O43548 720 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 MOCS3O95396 460 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 DNAJB2P25686 324 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 EPHB3P54753 998 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CAMK1Q14012 370 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 VEPH1Q14D04 833 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 DUSP6Q16828 381 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 MSANTD2Q6P1R3 559 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 DENND5BQ6ZUT9 1274 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 GPRIN1Q7Z2K8 1008 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 POLNQ7Z5Q5 900 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 VSIG1Q86XK7 387 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 PSMG2Q969U7 264 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 MRPL38Q96DV4 380 aaKnown RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 MCEEQ96PE7 176 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CNPY3Q9BT09 278 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ZMYM5Q9UJ78 669 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 RASAL2Q9UJF2 1139 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 SALL4Q9UJQ4 1053 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ZDBF2Q9HCK1 2354 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 A0A0U1RQJ8 604 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 GRM6O15303 877 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 LCP1P13796 627 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 MATKP42679 507 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 ALDH1A3P47895 512 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 RGS7P49802 495 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 CCDC142Q17RM4 750 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 STRADAQ7RTN6 431 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 ELMOD1Q8N336 334 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 SPDYE1Q8NFV5 336 aaPredicted RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 ATRIPQ8WXE1 791 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 CD101Q93033 1021 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 KCNK16Q96T55 309 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 ALG13Q9NP73 1137 aaKnown RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.79□□□□□ -1
PTPDC1-201ENST00000288976 ANAPC7Q9UJX3 599 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 MYO1FO00160 1098 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 C2CD2LO14523 706 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 PALMO75781 387 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 SEC24AO95486 1093 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 YWHAQP27348 245 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 CTNNA1P35221 906 aaKnown RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 NOS2P35228 1153 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 YWHAZP63104 245 aaKnown RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 MGAT5BQ3V5L5 792 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 PLPP4Q5VZY2 271 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 KLHDC10Q6PID8 442 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 MON1AQ86VX9 555 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 PSTKQ8IV42 348 aaKnown RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -1
PTPDC1-201ENST00000288976 SEPT5Q99719 369 aaPredicted RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 NAPGQ99747 312 aaPredicted RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 ULBP1Q9BZM6 244 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 OSGEPQ9NPF4 335 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 TLR8Q9NR97 1041 aaKnown RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 FAM8A1Q9UBU6 413 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 TRIM10Q9UDY6 481 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 STAP1Q9ULZ2 295 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 CAPN6Q9Y6Q1 641 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 ZNF487B1APH4 448 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 SRGAP2BP0DMP2 458 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 YWHAGP61981 247 aaKnown RBP eCLIP8.79□□□□□ -1
PTPDC1-201ENST00000288976 DUSP4Q13115 394 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 DNAJC21Q5F1R6 531 aaKnown RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 PAPD7Q5XG87 772 aaKnown RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 CAPN12Q6ZSI9 719 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 ATAD1Q8NBU5 361 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 SREK1Q8WXA9 508 aaKnown RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 HES6Q96HZ4 224 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 PRDM16Q9HAZ2 1276 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.79□□□□□ -1
PTPDC1-201ENST00000288976 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.79□□□□□ -1
PTPDC1-201ENST00000288976 DUSP10Q9Y6W6 482 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 V9GYY5 206 aaPredicted RBP8.79□□□□□ -1
PTPDC1-201ENST00000288976 CLUHO75153 1309 aa8.79□□□□□ -1
PTPDC1-201ENST00000288976 RRP9O43818 475 aaKnown RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 LTFP02788 710 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 DDX6P26196 483 aaKnown RBP eCLIP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms