RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 TIMMDC1Q9NPL8 285 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 DDX4Q9NQI0 724 aaKnown RBP16.81■□□□□ 0.28
GPC1-201ENST00000264039 RBAKQ9NYW8 714 aaPredicted RBP16.81■□□□□ 0.28
GPC1-201ENST00000264039 UBAP1Q9NZ09 502 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 COQ6Q9Y2Z9 468 aa16.81■□□□□ 0.28
GPC1-201ENST00000264039 ZNF536O15090 1300 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 P4HA2O15460 535 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 CALB1P05937 261 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 CYP3A4P08684 503 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 CCDC130P13994 396 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 NME5P56597 212 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 PPP4CP60510 307 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 FRMD7Q6ZUT3 714 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 RNF135Q8IUD6 432 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 PHTF2Q8N3S3 785 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 CHD4Q14839 1912 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 CD48P09326 243 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 TMEM191BP0C7N4 346 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 STIP1P31948 543 aaKnown RBP16.8■□□□□ 0.28
GPC1-201ENST00000264039 GPSM2P81274 684 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 DPYSL3Q14195 570 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 RPS6KA2Q15349 733 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 TBCCQ15814 346 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 FBXL19Q6PCT2 694 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 IGDCC3Q8IVU1 814 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 RCN3Q96D15 328 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 CCDC17Q96LX7 622 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 LENG8Q96PV6 779 aaPredicted RBP16.8■□□□□ 0.28
GPC1-201ENST00000264039 SNX25Q9H3E2 840 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 DBNDD1Q9H9R9 158 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 KCNK13Q9HB14 408 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 PLLPQ9Y342 182 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 NALCNQ8IZF0 1738 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 A0A088AWK7 358 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 AMHP03971 560 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 CDH3P22223 829 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 KLRC2P26717 231 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 HMOX2P30519 316 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 SREBF1P36956 1147 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 NR1D2Q14995 579 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 TDRPQ86YL5 185 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
GPC1-201ENST00000264039 THNSL1Q8IYQ7 743 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 FBXW8Q8N3Y1 598 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 HAPLN3Q96S86 360 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 CCDC28BQ9BUN5 200 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 ATP11BQ9Y2G3 1177 aa16.8■□□□□ 0.28
GPC1-201ENST00000264039 RPL10P27635 214 aaKnown RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 PTK2BQ14289 1009 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 MOCOSQ96EN8 888 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 IFT43Q96FT9 208 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 ADPGKQ9BRR6 497 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 WDR18Q9BV38 432 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 TCF7L2Q9NQB0 619 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 PSMD13Q9UNM6 376 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 COL1A1P02452 1464 aaPredicted RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 CXorf49A8MYA2 514 aaPredicted RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 BHMG1C9JSJ3 638 aaPredicted RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 TFAP2AP05549 437 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 ATP2B4P23634 1241 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 HADHBP55084 474 aaKnown RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 OCA2Q04671 838 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 PABPC1LQ4VXU2 614 aaKnown RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 CDR2LQ86X02 465 aaPredicted RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 PARP8Q8N3A8 854 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 SNX31Q8N9S9 440 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 ZNF606Q8WXB4 792 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 HSD17B14Q9BPX1 270 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 DDX56Q9NY93 547 aaKnown RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 TLK1Q9UKI8 766 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 TBX20Q9UMR3 447 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 MRPL11Q9Y3B7 192 aaKnown RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 ATP9BO43861 1147 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 MTX3Q5HYI7 312 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 TRMT10BQ6PF06 316 aaKnown RBP16.79■□□□□ 0.28
GPC1-201ENST00000264039 C16orf89Q6UX73 402 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 PRR12Q9ULL5 1215 aa16.79■□□□□ 0.28
GPC1-201ENST00000264039 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 K7ERI5 159 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 PPM1JQ5JR12 505 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 DPY19L2P1Q6NXN4 242 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 C10orf107Q8IVU9 208 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 ABRAQ8N0Z2 381 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 PDCD6IPQ8WUM4 868 aaKnown RBP16.78■□□□□ 0.28
GPC1-201ENST00000264039 DCAKDQ8WVC6 231 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 GCOM2Q9BZD3 368 aaPredicted RBP16.78■□□□□ 0.28
GPC1-201ENST00000264039 WRAP73Q9P2S5 460 aaPredicted RBP16.78■□□□□ 0.28
GPC1-201ENST00000264039 WDR46O15213 610 aaKnown RBP16.78■□□□□ 0.28
GPC1-201ENST00000264039 GARSP41250 739 aaKnown RBP16.78■□□□□ 0.28
GPC1-201ENST00000264039 NME3Q13232 169 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 DUS1LQ6P1R4 473 aaKnown RBP16.78■□□□□ 0.28
GPC1-201ENST00000264039 SIX6OS1Q8N1H7 587 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 HELQQ8TDG4 1101 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 CNDP1Q96KN2 507 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 FBXO28Q9NVF7 368 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 AGO2Q9UKV8 859 aaKnown RBP16.78■□□□□ 0.28
GPC1-201ENST00000264039 PCDHGB4Q9UN71 923 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 ZNF510Q9Y2H8 683 aa16.78■□□□□ 0.28
GPC1-201ENST00000264039 PCDHGB5Q9Y5G0 923 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms