RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 OXNAD1Q96HP4 312 aaPredicted RBP16.98■□□□□ 0.31
TM9SF1-201ENST00000261789 NT5C1AQ9BXI3 368 aa16.98■□□□□ 0.31
TM9SF1-201ENST00000261789 C20orf27Q9GZN8 174 aa16.98■□□□□ 0.31
TM9SF1-201ENST00000261789 CYP3A43Q9HB55 503 aa16.98■□□□□ 0.31
TM9SF1-201ENST00000261789 SLC17A6Q9P2U8 582 aa16.98■□□□□ 0.31
TM9SF1-201ENST00000261789 MTO1Q9Y2Z2 717 aaKnown RBP16.98■□□□□ 0.31
TM9SF1-201ENST00000261789 A0A0G2JMZ2 1700 aa16.98■□□□□ 0.31
TM9SF1-201ENST00000261789 LRRC37A2A6NM11 1700 aa16.98■□□□□ 0.31
TM9SF1-201ENST00000261789 ADM5C9JUS6 153 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 SNRPAP09012 282 aaKnown RBP16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 P4HA1P13674 534 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 PHKA2P46019 1235 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 TMPRSS15P98073 1019 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 BST1Q10588 318 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 ACSBG2Q5FVE4 666 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 SPDYAQ5MJ70 313 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 ZCCHC23Q6ZST2 131 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 EXOC8Q8IYI6 725 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 ENDOVQ8N8Q3 282 aaKnown RBP16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 PCMTD2Q9NV79 361 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 PLLPQ9Y342 182 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 MFHAS1Q9Y4C4 1052 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 LRRC42Q9Y546 428 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 HMX2A2RU54 273 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 KRT36O76013 467 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 KRT37O76014 449 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 PDHA1P08559 390 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 ESRRAP11474 423 aaPredicted RBP16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 ATICP31939 592 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 HDAC4P56524 1084 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 ARID3BQ8IVW6 561 aaPredicted RBP16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 VPS52Q8N1B4 723 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 DTX3LQ8TDB6 740 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.316e-6■■■■□ 21.9
TM9SF1-201ENST00000261789 KIF12Q96FN5 646 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 KLC2Q9H0B6 622 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 RBPJLQ9UBG7 517 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 CSADQ9Y600 493 aa16.97■□□□□ 0.31
TM9SF1-201ENST00000261789 PAPSS1O43252 624 aaPredicted RBP16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 TGDSO95455 350 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 MCF2P10911 925 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 SDC4P31431 198 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 CRADDP78560 199 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 INCA1Q0VD86 236 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 CHI3L2Q15782 390 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 ZNF534Q76KX8 674 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 MCUR1Q96AQ8 359 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 SPDL1Q96EA4 605 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 MMP19Q99542 508 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 ASB7Q9H672 318 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 VRTNQ9H8Y1 702 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 BATF3Q9NR55 127 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 SNX9Q9Y5X1 595 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 CEP350Q5VT06 3117 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 APOEP02649 317 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 CYP2F1P24903 491 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 KCTD2Q14681 263 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 RCN1Q15293 331 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 BOLA3Q53S33 107 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 SLC9A4Q6AI14 798 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 TREML1Q86YW5 311 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 C7orf31Q8N865 590 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 PPP1R13LQ8WUF5 828 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 NLRP7Q8WX94 980 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 DHX35Q9H5Z1 703 aaKnown RBP16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 PNPLA8Q9NP80 782 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 ARHGEF4Q9NR80 690 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 ERAP1Q9NZ08 941 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 GINS2Q9Y248 185 aa16.96■□□□□ 0.31
TM9SF1-201ENST00000261789 DNAJC6O75061 913 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 SPAG6O75602 509 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 ENO1P06733 434 aaKnown RBP16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 PRKCHP24723 683 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 RBP5P82980 135 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 PDK2Q15119 407 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 NDUFAF2Q8N183 169 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 RTP4Q96DX8 246 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 FAXDC2Q96IV6 333 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 DPEP3Q9H4B8 488 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 NRDE2Q9H7Z3 1164 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 DCLRE1BQ9H816 532 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 SMNDC1O75940 238 aaKnown RBP eCLIP16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 NEBLO76041 1014 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 TGM2P21980 687 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 TNFAIP2Q03169 654 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 NRG4Q8WWG1 115 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 E2F7Q96AV8 911 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 SIGLEC10Q96LC7 697 aa16.95■□□□□ 0.3
TM9SF1-201ENST00000261789 H3BRJ5 948 aa16.94■□□□□ 0.3
TM9SF1-201ENST00000261789 ADORA2AP29274 412 aa16.94■□□□□ 0.3
TM9SF1-201ENST00000261789 SLC6A3Q01959 620 aa16.94■□□□□ 0.3
TM9SF1-201ENST00000261789 RCN2Q14257 317 aa16.94■□□□□ 0.3
TM9SF1-201ENST00000261789 GLRA4Q5JXX5 417 aa16.94■□□□□ 0.3
TM9SF1-201ENST00000261789 ANO7Q6IWH7 933 aa16.94■□□□□ 0.3
TM9SF1-201ENST00000261789 NUDCD3Q8IVD9 361 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms