RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 TKTP29401 623 aaKnown RBP18.4■□□□□ 0.54
SSB-201ENST00000260956 PBX2P40425 430 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 PNPLA4P41247 253 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 RABGGTBP53611 331 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 RASA2Q15283 850 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 SKIDA1Q1XH10 827 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 SLC9A4Q6AI14 798 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 B4GALNT4Q76KP1 1039 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 SPATS2Q86XZ4 545 aaKnown RBP18.4■□□□□ 0.54
SSB-201ENST00000260956 RTP4Q96DX8 246 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 RNF157Q96PX1 679 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 APOL6Q9BWW8 343 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 B3GNT5Q9BYG0 378 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 GOLGA2P5Q9HBQ8 144 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 PCDH18Q9HCL0 1135 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 SAYSD1Q9NPB0 183 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 SLC4A7Q9Y6M7 1214 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 TRANK1O15050 2925 aa18.39■□□□□ 0.54
SSB-201ENST00000260956 BAIAP3O94812 1187 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 TMEM63AO94886 807 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 MYOGP15173 224 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 WARSP23381 471 aaKnown RBP18.39■□□□□ 0.53
SSB-201ENST00000260956 BCAT1P54687 386 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 CDH6P55285 790 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 EIF3EP60228 445 aaKnown RBP18.39■□□□□ 0.53
SSB-201ENST00000260956 BST2Q10589 180 aaKnown RBP18.39■□□□□ 0.53
SSB-201ENST00000260956 MPP2Q14168 576 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 CA9Q16790 459 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 RFX6Q8HWS3 928 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 CRIPAKQ8N1N5 446 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 RIBC1Q8N443 379 aaPredicted RBP18.39■□□□□ 0.53
SSB-201ENST00000260956 PLD5Q8N7P1 536 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 OR6B3Q8NGW1 331 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 ARHGEF2Q92974 986 aaKnown RBP18.39■□□□□ 0.53
SSB-201ENST00000260956 TTC25Q96NG3 672 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 SELENOSQ9BQE4 189 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 SNRNP25Q9BV90 132 aaKnown RBP18.39■□□□□ 0.53
SSB-201ENST00000260956 ACTL7BQ9Y614 415 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 PRUNE2Q8WUY3 3088 aa18.39■□□□□ 0.53
SSB-201ENST00000260956 A8MXQ7 604 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 CDH16O75309 829 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 TAF6P49848 677 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 PDK2Q15119 407 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 MSS51Q4VC12 460 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 NPNTQ6UXI9 565 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 PPIL6Q8IXY8 311 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 CLEC4CQ8WTT0 213 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 FAM172AQ8WUF8 416 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 TRIM6Q9C030 488 aaPredicted RBP18.38■□□□□ 0.53
SSB-201ENST00000260956 USP29Q9HBJ7 922 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 UBN1Q9NPG3 1134 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 HESX1Q9UBX0 185 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 NAALADL1Q9UQQ1 740 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 REV3LO60673 3130 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 PTPRSQ13332 1948 aa18.38■□□□□ 0.53
SSB-201ENST00000260956 A0A087WUV0 522 aaPredicted RBP18.37■□□□□ 0.53
SSB-201ENST00000260956 TCRBV7S3A2A0A539 114 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 FOXO6A8MYZ6 492 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 RBP3P10745 1247 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 ATP2A2P16615 1042 aaKnown RBP18.37■□□□□ 0.53
SSB-201ENST00000260956 GPX6P59796 221 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 TFDP2Q14188 446 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 DSC3Q14574 896 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 BOLA3Q53S33 107 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 ZC3H12AQ5D1E8 599 aaKnown RBP18.37■□□□□ 0.53
SSB-201ENST00000260956 OTUD1Q5VV17 481 aaPredicted RBP18.37■□□□□ 0.53
SSB-201ENST00000260956 TAOK1Q7L7X3 1001 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 BNIPLQ7Z465 357 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 YTHDF3Q7Z739 585 aaKnown RBP18.37■□□□□ 0.53
SSB-201ENST00000260956 SCUBE3Q8IX30 993 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 TOP6BLQ8N6T0 577 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 GSTCDQ8NEC7 633 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 PCDH19Q8TAB3 1148 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 APBB2Q92870 758 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 CHMP6Q96FZ7 201 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 CALN1Q9BXU9 219 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 GPATCH2LQ9NWQ4 482 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 TRIM66O15016 1216 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 MCF2LO15068 1137 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 GPR182O15218 404 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 XPOTO43592 962 aaKnown RBP18.37■□□□□ 0.53
SSB-201ENST00000260956 ARHGEF15O94989 841 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 IFNB1P01574 187 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 FAM163BP0C2L3 166 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 IGFBP6P24592 240 aaPredicted RBP18.37■□□□□ 0.53
SSB-201ENST00000260956 SDC4P31431 198 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 CDR1P51861 262 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 LILRA4P59901 499 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 CDO1Q16878 200 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 SV2CQ496J9 727 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 FAM117BQ6P1L5 589 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 PCGF5Q86SE9 256 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 SPATA18Q8TC71 538 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 ADAM2Q99965 735 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 ZNF670Q9BS34 389 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 TSPYL2Q9H2G4 693 aaPredicted RBP18.37■□□□□ 0.53
SSB-201ENST00000260956 MTMR10Q9NXD2 777 aa18.37■□□□□ 0.53
SSB-201ENST00000260956 MICAL3Q7RTP6 2002 aa18.36■□□□□ 0.53
SSB-201ENST00000260956 TMEM120BA0PK00 339 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms