RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 RIPK2O43353 540 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 PYGMP11217 842 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 CSF2RAP15509 400 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 GPD2P43304 727 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 ADCY2Q08462 1091 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 DNAJC3Q13217 504 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 NME3Q13232 169 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 PIGZQ86VD9 579 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 SPATA2LQ8IUW3 424 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 RHOT1Q8IXI2 618 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 MAGEC3Q8TD91 643 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 P3H4Q92791 437 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 KCNK16Q96T55 309 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 MAK16Q9BXY0 300 aaKnown RBP12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 WNT8AQ9H1J5 351 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 VRTNQ9H8Y1 702 aa12.19□□□□□ -0.46
TNFAIP1-201ENST00000226225 EOMESO95936 686 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 BST2Q10589 180 aaKnown RBP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 C15orf59Q2T9L4 293 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 DCAF6Q58WW2 860 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 LCLAT1Q6UWP7 414 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 KCTD6Q8NC69 237 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 FBF1Q8TES7 1133 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 VCPIP1Q96JH7 1222 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 C9orf72Q96LT7 481 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 TMEM161AQ9NX61 479 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CNTN6Q9UQ52 1028 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 DPPA5A6NC42 116 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 BTNL10A8MVZ5 291 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 DDX3YO15523 660 aaKnown RBP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 MAP3K13O43283 966 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 PRPSAP2O60256 369 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 PROSCO94903 275 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CLTBP09497 229 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 DNAJB2P25686 324 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CHKAP35790 457 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 TUBP50607 506 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 TMED2Q15363 201 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 TAF12Q16514 161 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 UPP1Q16831 310 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CLLU1OSQ5K130 101 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 DCLRE1AQ6PJP8 1040 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 FAM183BPQ6ZVS7 135 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 TOP6BLQ8N6T0 577 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 TTC8Q8TAM2 541 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 RXFP2Q8WXD0 754 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 NAF1Q96HR8 494 aaKnown RBP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CDC42EP4Q9H3Q1 356 aaKnown RBP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CBX6O95503 412 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 AGTP01019 485 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 KRT10P13645 584 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CCND1P24385 295 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 INCA1Q0VD86 236 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 MPP2Q14168 576 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 ZNF268Q14587 947 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CTXN3Q4LDR2 81 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 SDHAF4Q5VUM1 108 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 PRELID2Q8N945 189 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CLEC4CQ8WTT0 213 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 PCED1BQ96HM7 432 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 CFAP57Q96MR6 1250 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 PITPNM3Q9BZ71 974 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 AVENQ9NQS1 362 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 WDR35Q9P2L0 1181 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 PCDHGC3Q9UN70 934 aa12.18□□□□□ -0.46
TNFAIP1-201ENST00000226225 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 ENTPD5O75356 428 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 SMNDC1O75940 238 aaKnown RBP eCLIP12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 HSPA8P11142 646 aaKnown RBP12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 LRPAP1P30533 357 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 CDK7P50613 346 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 NKX3-2P78367 333 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 KRT81Q14533 505 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 CCDC6Q16204 474 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 SLC39A12Q504Y0 691 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 ZDHHC14Q8IZN3 488 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 PIWIL1Q96J94 861 aaKnown RBP12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 ZNF333Q96JL9 665 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 NUDCD1Q96RS6 583 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 YME1L1Q96TA2 773 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 TSC22D3Q99576 134 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 SLCO1B3Q9NPD5 702 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 GDAP2Q9NXN4 497 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 GRHL1Q9NZI5 618 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 ARHGEF37A1IGU5 675 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 IFNB1P01574 187 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 SYN1P17600 705 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 TKTL1P51854 596 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 DSC3Q14574 896 aa12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 FAM43BQ6ZT52 329 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
TNFAIP1-201ENST00000226225 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms