RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Ints6lQ8BND4 861 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Washc5Q8C2E7 1159 aaKnown RBP11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Syt15Q8C6N3 418 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Olfr458Q8VF80 313 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Olfr457Q8VGP5 313 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Map4k3Q99JP0 894 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Thg1lQ9CY52 298 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Tssk3Q9D2E1 268 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Dmap1Q9JI44 468 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Prg3Q9JL95 222 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Abt1Q9QYL7 269 aaKnown RBP11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 NumbQ9QZS3 653 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Col4a3Q9QZS0 1669 aa11.7□□□□□ -0.54
Lig1-211ENSMUST00000177588 Rap1gapA2ALS5 663 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Apol11aE9PZG0 334 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Svs3aF2Z472 265 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Mxi1P50540 228 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Dsc2P55292 902 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Atp5bP56480 529 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Rnf220Q6PDX6 566 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Tbx10Q810F8 385 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Svs3bQ8BZH8 265 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Lin52Q8CD94 116 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Stau2Q8CJ67 570 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Fam83aQ8K2P2 436 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Rnf112Q96DY5 654 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ndc80Q9D0F1 642 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ubxn11Q9D572 484 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ccdc103Q9D9P2 237 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Tubb3Q9ERD7 450 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Ube4bQ9ES00 1173 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Cul3Q9JLV5 768 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 C1qtnf1Q9QXP7 281 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Trpc3Q9QZC1 836 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Olfr1305A2AVW3 312 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Vav1P27870 845 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 SftpdP50404 374 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Taf1bP97358 586 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Samhd1Q60710 627 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Fndc3bQ6NWW9 1207 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Kcns3Q8BQZ8 491 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Slc4a7Q8BTY2 1034 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Trub1Q8C0D0 338 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Q8CIL4 281 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Olfr390Q8VEZ7 311 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Wbp11Q923D5 641 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Tas1r2Q925I4 843 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Spata1Q9D5R4 444 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Slc25a19Q9DAM5 318 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Rassf7Q9DD19 359 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Jph2Q9ET78 696 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Hic1Q9R1Y5 733 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Krt16Q9Z2K1 469 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Vmn2r72D3Z4N8 856 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Nek2O35942 443 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 UmpsP13439 481 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Glb1P23780 647 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 S100bP50114 92 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Bop1P97452 732 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Nsun2Q1HFZ0 757 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Tars2Q3UQ84 723 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Stx3Q64704 289 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Srd5a1Q68FF9 255 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Fcrl5Q68SN8 596 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Olfr670Q7TRP3 312 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Phactr3Q8BYK5 558 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 ChiaQ91XA9 473 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Efhc1Q9D9T8 648 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 DcpsQ9DAR7 338 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Scyl1Q9EQC5 806 aaKnown RBP11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Nudt5Q9JKX6 218 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Vmn2r25W4VSP2 855 aa11.69□□□□□ -0.54
Lig1-211ENSMUST00000177588 Pdia2D3Z6P0 527 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 PtgisO35074 501 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 SpibO35906 267 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Grpel2O88396 224 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Hoxc6P10629 235 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Kcna2P63141 499 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 PrkcqQ02111 707 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Plppr4Q7TME0 766 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Mcph1Q7TT79 822 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Kat14Q8CID0 779 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Sorcs3Q8VI51 1219 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 MutyhQ99P21 515 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Tmbim4Q9DA39 238 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Tmem59Q9QY73 323 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Gm12394A2AKP6 982 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Celf5D3Z4T1 395 aaKnown RBP11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Gm8444F6XS56 118 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Il1rapl1P59823 695 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Cdh8P97291 799 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Klra8Q60682 266 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Brsk2Q69Z98 735 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Zfp454Q80Y34 536 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Echs1Q8BH95 290 aaKnown RBP11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Rsl1d1Q8BVY0 452 aaKnown RBP11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Nudt13Q8JZU0 352 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Mrpl58Q8R035 206 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Alg9Q8VDI9 611 aa11.68□□□□□ -0.54
Lig1-211ENSMUST00000177588 Trps1Q925H1 1281 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms