RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 PolnQ7TQ07 864 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Syt12Q920N7 421 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Serbp1Q9CY58 407 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tjp2Q9Z0U1 1167 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Atf6F6VAN0 656 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 AK157302I3ITR1 129 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Vmn2r77L7N2B7 854 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Atn1O35126 1175 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Clk2O35491 499 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 RadilQ69Z89 1099 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rusc1Q8BG26 893 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Kank2Q8BX02 843 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Isca1Q9D924 129 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ppp1r36D3Z0R2 411 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Hoxc6P10629 235 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mrgprx1Q8CIP3 322 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Dlc1Q9R0Z9 1092 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 4921501E09RikA0A0R4J054 908 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rbm20Q3UQS8 1199 aaKnown RBP17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Hkdc1Q91W97 915 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Aox3G3X982 1335 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 OmdO35103 423 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Slc16a8O35308 492 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mt-CybP00158 381 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mief2Q5NCS9 454 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Chsy1Q6ZQ11 800 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Btbd10Q80X66 475 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rnaseh2bQ80ZV0 308 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Q9CQF4 240 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rnf25Q9QZR0 456 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Myl4P09541 193 aaKnown RBP17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Smad1P70340 465 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Psen2Q61144 448 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rec114Q9CWH4 259 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Stk25Q9Z2W1 426 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Xlr5bA2BI50 236 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mroh4G3X8W1 983 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rgs9bpQ148R9 237 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Fam198aQ3UY90 562 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Grm4Q68EF4 912 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zdhhc17Q80TN5 632 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Map3k21Q8VDG6 1002 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Idh3bQ91VA7 384 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 GsdmcQ99NB5 468 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Slc12a4Q9JIS8 1085 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Hs6st1Q9QYK5 411 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 PfkpQ9WUA3 784 aaKnown RBP17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Myl12bQ3THE2 172 aaKnown RBP17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Trim67Q505D9 768 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Xlr3bQ6P205 226 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Snapc1Q8K0S9 389 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Creld1Q91XD7 420 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Dyrk1bQ9Z188 629 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Disc1Q811T9 852 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Map10Q8BJS7 891 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Q8CIL4 281 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Taldo1Q93092 337 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Dis3Q9CSH3 958 aaKnown RBP17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 PgdQ9DCD0 483 aa17.03■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 4930503E14RikQ9D583 177 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Gipc2Q9Z2H7 314 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 XntrpcF8VQM8 1264 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tnk2O54967 1055 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Pou2f3P31362 431 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 C2cd2lQ80X80 706 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Dpy30Q99LT0 99 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Wwp2Q9DBH0 870 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Dkk3Q9QUN9 349 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Trpc2Q9R244 1172 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Vmn2r46L7N282 809 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tas2r109Q7M707 316 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 CyldQ80TQ2 952 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mrpl2Q9D773 306 aaKnown RBP17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tsc22d3Q9Z2S7 137 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zfp472B0V2W5 534 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cyp2c67Q569X9 491 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 PhgdhQ61753 533 aaKnown RBP17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Nlrp9bQ66X22 1003 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tarsl2Q8BLY2 790 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ddx28Q9CWT6 540 aaKnown RBP17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Kcnh4A2A5F7 1018 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Olfr414E9Q5P8 317 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rag1P15919 1040 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 ChgbP16014 677 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 ProcP33587 460 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ripk2P58801 539 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Bbs1Q3V3N7 593 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ints6Q6PCM2 883 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cox18Q8VC74 331 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ndfip2Q91ZP6 311 aa17.02■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Srsf11E9Q6E5 511 aaKnown RBP17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 GclmO09172 274 aaKnown RBP17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nr2c2P49117 596 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Hesx1Q61658 185 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gga2Q6P5E6 603 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Slc30a5Q8R4H9 761 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 MetP16056 1379 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nek2O35942 443 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gbx2P48031 348 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Grm1P97772 1199 aa17.02■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms