RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Pold2O35654 469 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Il1rl1P14719 567 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Csn1s1P19228 313 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Wnt10bP48614 389 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ly9Q01965 654 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ogfod1Q3U0K8 545 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mrgprx2Q3UG50 352 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 A1cfQ5YD48 595 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 GpamQ61586 827 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tas2r125Q7M710 311 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Vangl2Q91ZD4 521 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Slc39a3Q99K24 317 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pex5O09012 639 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 AurkcO88445 282 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 S100a9P31725 113 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Kpnb1P70168 876 aaKnown RBP17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ugt1a2P70691 533 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Polr1bP70700 1135 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rcsd1Q3UZA1 412 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Trpc1Q61056 793 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ugt1a1Q63886 535 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ttc23Q8CHY7 488 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tbrg4Q91YM4 630 aaKnown RBP17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CenpsQ9D084 142 aa17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ndufs3Q9DCT2 263 aaKnown RBP17.08■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Npr3P70180 536 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Pla2g6P97819 807 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Zc3hav1Q3UPF5 946 aaKnown RBP17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Pdp2Q504M2 532 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 PostnQ62009 838 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Slc26a2Q62273 739 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Q80WR5 230 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Ddhd1Q80YA3 547 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Rftn2Q8CHX7 500 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Ms4a14A0A087WSD2 1232 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Arhgef9Q3UTH8 516 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Kpna1Q60960 538 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Cpa1Q7TPZ8 419 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Zdhhc17Q80TN5 632 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Pnma2Q8BHK0 365 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Vps50Q8CI71 964 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Angel1Q8VCU0 667 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Exd2Q8VEG4 650 aaKnown RBP17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Rilpl2Q99LE1 197 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Nipsnap3bQ9CQE1 247 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Poc5Q9DBS8 558 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Scgb2b19J3QM75 112 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 GckP52792 465 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 YwhazP63101 245 aaKnown RBP17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Plcl1Q3USB7 1096 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Ttc9Q3V038 219 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Olfr23Q7TRX4 325 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Znf569Q80W31 679 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Rbm22Q8BHS3 420 aaKnown RBP17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 SntnQ8C9X1 147 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Unc45aQ99KD5 944 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Cyp2c55Q9D816 490 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Kat2bQ9JHD1 813 aa17.08■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Apold1E9Q0X2 246 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Mov10P23249 1004 aaKnown RBP17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Sstr1P30873 391 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Aldh2P47738 519 aaKnown RBP17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Egfl8Q6GUQ1 293 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Best3Q6H1V1 669 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Prpf18Q8BM39 342 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Q8CC96 669 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Zbtb8bQ8CII0 484 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Q9D4A5 307 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 ThegQ9JMB1 375 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 RelaQ04207 549 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Gpatch4Q3TFK5 415 aaKnown RBP17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Akap14Q3V0I7 536 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 P3h1Q3V1T4 739 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Hist2h2acQ64523 129 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Hist2h2aa1Q6GSS7 130 aaKnown RBP17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 DnmbpQ6TXD4 1580 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Plekha8Q80W71 519 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Mamdc2Q8CG85 686 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Smim11aQ99J19 55 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Pdxdc1Q99K01 787 aaKnown RBP17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Ttc30bQ9CY00 664 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Stx11Q9D3G5 287 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Ror1Q9Z139 937 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Gm45208A0A140LJ36 292 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Lrrc73B2RWC4 316 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Vmn2r7E9PYL5 915 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Vmn2r3H3BJ88 915 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Vmn2r6H3BK29 913 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Il13ra2O88786 383 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Pgk2P09041 417 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Slc1a2P43006 572 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Cdh8P97291 799 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Dab1P97318 588 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Lilrb3P97484 841 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Kcnd1Q03719 651 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Fdxacb1Q3UY23 622 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Grik4Q8BMF5 956 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Cpne3Q8BT60 533 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Slc47a1Q8K0H1 567 aa17.07■□□□□ 0.32
Ubfd1-201ENSMUST00000033158 Fam83aQ8K2P2 436 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms