RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Lamb2Q61292 1799 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Kpna7C0LLJ0 499 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gcnt4E9Q649 455 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Vmn2r39L7N2E5 861 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 HcrtO55241 130 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Aoc3O70423 765 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Fam172aQ3TNH5 417 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 XiapQ60989 496 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Soat1Q61263 540 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Frmd5Q6P5H6 517 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Usp8Q80U87 1080 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Fbxw8Q8BIA4 598 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 SowahcQ8C0J6 512 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Taf2Q8C176 1104 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Prr33Q8C494 260 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tmprss4Q8VCA5 435 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Necab2Q91ZP9 389 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Slc12a9Q99MR3 914 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tekt1Q9DAJ2 418 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tm9sf1Q9DBU0 606 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rab27aQ9ERI2 221 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Vwa7Q9JHA8 891 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ptpn11P35235 597 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tfdp1Q08639 410 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 CttnQ60598 546 aaKnown RBP16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ddr2Q62371 854 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rab34Q64008 259 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Trpv1Q704Y3 839 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Eva1bQ8K2Y3 164 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gga1Q8R0H9 635 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ggt7Q99JP7 662 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ube4bQ9ES00 1173 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ccdc86Q9JJ89 426 aa16.76■□□□□ 0.27
Trim28-201ENSMUST00000005705 Kcng2F7A6P6 480 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Hoxc6P10629 235 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Hoxc10P31257 342 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Stmn1P54227 149 aaKnown RBP16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Prkaa1Q5EG47 559 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tmem260Q8BMD6 703 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Smyd2Q8R5A0 433 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Clptm1Q8VBZ3 664 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Olfr615Q8VGY4 313 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Micu3Q9CTY5 523 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rpap3Q9D706 660 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Dusp21Q9D9D8 189 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Actl7bQ9QY83 418 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Unc80Q8BLN6 3261 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Smim10l2aA0A0B4J1F8 78 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gm8444F6XS56 118 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Spin2fJ3QPU0 254 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Dnase1l3O55070 310 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Q14AM7 275 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pnpla5Q32LZ8 432 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gdpd5Q640M6 607 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tdp1Q8BJ37 609 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Trpc5Q9QX29 975 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gm27029A2A4P4 543 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Vmn2r103E9PWW0 856 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 SprtnG3X912 497 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Drg1P32233 367 aaKnown RBP16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cntn3Q07409 1028 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gm3414Q3TNU4 584 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Adrbk2Q3UYH7 688 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Als2clQ60I26 952 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Psd2Q6P1I6 770 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 SowahaQ8BLS7 548 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Hectd2Q8CDU6 774 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Wdr98Q8VC42 657 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Olfr395Q8VGR3 312 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pcdhga10Q91XY9 930 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Xpo5Q924C1 1204 aaKnown RBP16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 GOLGA7BQ9D428 167 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rmdn1Q9DCV4 305 aa16.75■□□□□ 0.27
Trim28-201ENSMUST00000005705 Sh3pxd2bA2AAY5 908 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gm28043E0CXC2 719 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Itgb3O54890 787 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rps12P63323 132 aaKnown RBP16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gm10392Q3V3I3 114 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Prl3a1Q78Y73 227 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Arhgap29Q8CGF1 1266 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Itm2cQ91VK4 269 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cab39lQ9DB16 337 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Chst7Q9EP78 484 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Krt16Q9Z2K1 469 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Arhgef37A1IGU4 676 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ptar1E9QAB6 424 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pgk1P09411 417 aaKnown RBP16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cyp2c29Q64458 490 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 PoliQ6R3M4 717 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Mrgprb8Q7TN51 330 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Olfr392Q7TRX6 312 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gxylt2Q810K9 444 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pan2Q8BGF7 1200 aaKnown RBP16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pcmtd2Q8BHD8 359 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Clic5Q8BXK9 251 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Slc35f5Q8R314 524 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 IrgqQ8VIM9 583 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 FtcdQ91XD4 541 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Oma1Q9D8H7 521 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ap2b1Q9DBG3 937 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms