RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Zscan4dA7KBS4 506 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 UprtB1AVZ0 310 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 F6Y6L6 278 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 C130060K24RikG3UWA8 416 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Fgf15O35622 218 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Aff2O55112 1272 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Il3P01586 166 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Serpinb2P12388 415 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 LdhbP16125 334 aaKnown RBP12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Rasgrf1P27671 1262 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Elk4P41158 430 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Nr2c2P49117 596 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Arhgap17Q3UIA2 846 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Zscan4fQ3URS2 506 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 PrkciQ62074 595 aaKnown RBP12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 ProcrQ64695 242 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Zscan4cQ80VJ6 506 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Ireb2Q811J3 963 aaKnown RBP12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Tmem74Q8BQU7 305 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Wwp1Q8BZZ3 918 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Ccdc17Q8CE13 565 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Tmem132cQ8CEF9 1099 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Acvr1cQ8K348 493 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Bst2Q8R2Q8 172 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Tbc1d22aQ8R5A6 516 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 BsndQ8VIM4 307 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Itm2cQ91VK4 269 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Epn3Q91W69 636 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Sec16bQ91XT4 1051 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Ttc30bQ9CY00 664 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 MceeQ9D1I5 178 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Rassf7Q9DD19 359 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Tmod2Q9JKK7 351 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 A0A1Y7VP24 259 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Ttll6A4Q9E8 822 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Olfr292F8VQ84 308 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Mdm4O35618 489 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 GsrP47791 500 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 YwhagP61982 247 aaKnown RBP12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 SpoplQ2M2N2 392 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Ankrd27Q3UMR0 1048 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Pcnx4Q3UVY5 1174 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Zfp956Q3UZY6 572 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Gm11437Q5QR91 290 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Nr1h2Q60644 446 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Mfn1Q811U4 741 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Mettl21cQ8BLU2 248 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Rhpn2Q8BWR8 686 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Rfx6Q8C7R7 927 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Sulf1Q8K007 870 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 UvragQ8K245 698 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Lurap1lQ8K2P1 221 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Olfr615Q8VGY4 313 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 PlvapQ91VC4 438 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Smap1Q91VZ6 440 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Nmd3Q99L48 503 aaKnown RBP12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Ecrg4Q99LS0 148 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Mtfr1Q99MB2 328 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Cnot11Q9CWN7 505 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Vps28Q9D1C8 221 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 PrameQ9D4Z5 464 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Dcun1d1Q9QZ73 259 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 ClcnkbQ9WUB6 687 aa12.47□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Gm29133A0A1B0GT72 266 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Ism2D3Z6A3 493 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Hmgxb3G3X9M3 1254 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Zfp457L7N1X4 647 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Dpysl4O35098 572 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Nptx2O70340 429 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Stra6O70491 670 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Slc27a3O88561 667 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Mcpt1P11034 246 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Lamp2P17047 415 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Sipa1P46062 1037 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Rbp3P49194 1234 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 SftpbP50405 377 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Tarbp2P97473 365 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Nxpe4Q52KP5 543 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 GpamQ61586 827 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Ptpn14Q62130 1189 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Tfdp2Q64163 446 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Olfr798Q7TRH8 311 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Dars2Q8BIP0 653 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Yars2Q8BYL4 472 aaKnown RBP12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Apol7cQ8C6E1 369 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Kctd12bQ8C7J6 292 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Gpc3Q8CFZ4 579 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Gnl3Q8CI11 538 aaKnown RBP12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Zbtb8bQ8CII0 484 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 FtcdQ91XD4 541 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Wbp11Q923D5 641 aaKnown RBP12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Prpf19Q99KP6 504 aaKnown RBP12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Trem2Q99NH8 227 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Npm3Q9CPP0 175 aaKnown RBP12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Polr3cQ9D483 533 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 4930513O06RikQ9D549 161 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 NvlQ9DBY8 855 aaKnown RBP12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Trpc4apQ9JLV2 797 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Prkab1Q9R078 270 aa12.46□□□□□ -0.41
Ufd1-201ENSMUST00000005394 Prmt2Q9R144 448 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms