RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PCDHGB6Q9Y5F9 930 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 DNMT3AQ9Y6K1 912 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 DENND4CQ5VZ89 1909 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 PRRC2AP48634 2157 aaKnown RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 MEIS3P2A8K0S8 358 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 FOXO6A8MYZ6 492 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 STMND1H3BQB6 276 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 CBX4O00257 560 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 OPLAHO14841 1288 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 PRKAB2O43741 272 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 PRPF40AO75400 957 aaKnown RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 STBD1O95210 358 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 PMS2P54278 862 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 MCCD1P59942 119 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 KRTAP10-9P60411 292 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 ADAM8P78325 824 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 CLDN10P78369 228 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 ARID5AQ03989 594 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 GAB4Q2WGN9 574 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 ASPRV1Q53RT3 343 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 XKRXQ6PP77 449 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 GAREM2Q75VX8 874 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 PHTF2Q8N3S3 785 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 USP13Q92995 863 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 IFT43Q96FT9 208 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 TMEM74Q96NL1 305 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 JPH2Q9BR39 696 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 SDF4Q9BRK5 362 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 GMPR2Q9P2T1 348 aaKnown RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 STX8Q9UNK0 236 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 RBM19Q9Y4C8 960 aaKnown RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 ZNF451Q9Y4E5 1061 aa3.8□□□□□ -1.8
CCDC7-213ENST00000639290 RP1L1Q8IWN7 2480 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-213ENST00000639290 EVPLQ92817 2033 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 MTMR11A4FU01 709 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 SIGLEC6O43699 453 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 STSP08842 583 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 PDCP20941 246 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 SCNN1GP51170 649 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 NXPH1P58417 271 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 ACTR2P61160 394 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 ZBTB16Q05516 673 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 SFSWAPQ12872 951 aaKnown RBP3.79□□□□□ -1.8
CCDC7-213ENST00000639290 LAMB3Q13751 1172 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 EFCAB12Q6NXP0 572 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 CATSPER4Q7RTX7 472 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 RD3Q7Z3Z2 195 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 MON1AQ86VX9 555 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 CEP57Q86XR8 500 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 SMG8Q8ND04 991 aaKnown RBP3.79□□□□□ -1.8
CCDC7-213ENST00000639290 COX4I2Q96KJ9 171 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 SCLT1Q96NL6 688 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 SGK2Q9HBY8 427 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 CYLDQ9NQC7 956 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 PCDHGA3Q9Y5H0 932 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 UBIAD1Q9Y5Z9 338 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 A0A1B0GVM2 712 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 WFS1O76024 890 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 KIF4AO95239 1232 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 LY6G6DO95868 133 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 ADH1CP00326 375 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 GABRR2P28476 465 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 SPAM1P38567 509 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 RPL10AP62906 217 aaKnown RBP3.79□□□□□ -1.8
CCDC7-213ENST00000639290 IL9RQ01113 521 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 ZNF235Q14590 738 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 STARD3Q14849 445 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 TGIF1Q15583 401 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 QRICH1Q2TAL8 776 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 CCDC178Q5BJE1 867 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 TRIM68Q6AZZ1 485 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 MIS18BP1Q6P0N0 1132 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 DHX32Q7L7V1 743 aaKnown RBP3.79□□□□□ -1.8
CCDC7-213ENST00000639290 VASH2Q86V25 355 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 JAZF1Q86VZ6 243 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 JAMLQ86YT9 394 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 ZNF276Q8N554 614 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 METTL13Q8N6R0 699 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 ROBO4Q8WZ75 1007 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 NAT6Q93015 286 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 MTMR8Q96EF0 704 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 SLC46A2Q9BY10 475 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 MLXIPLQ9NP71 852 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 ATP13A2Q9NQ11 1180 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 ARHGEF4Q9NR80 690 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 GJB4Q9NTQ9 266 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 VTI1BQ9UEU0 232 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 FKBPLQ9UIM3 349 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC7-213ENST00000639290 PCDHB6Q9Y5E3 794 aa3.79□□□□□ -1.8
CCDC7-213ENST00000639290 FLNAP21333 2647 aaKnown RBP3.79□□□□□ -1.8
CCDC7-213ENST00000639290 MYH6P13533 1939 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 TBC1D3BA6NDS4 549 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 C10orf142B7Z368 130 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 ORC4O43929 436 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 PDGFAP04085 211 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 USP17L7P0C7H9 530 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 CCNYL3P0C7X3 344 aa3.78□□□□□ -1.8
CCDC7-213ENST00000639290 MLH1P40692 756 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms