RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	VGLL2	Q8N8G2	317 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	FBXO41	Q8TF61	875 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF75CP	Q92670	426 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	HPS3	Q969F9	1004 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SNX21	Q969T3	373 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	FKBP10	Q96AY3	582 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SCLT1	Q96NL6	688 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SH3GL1	Q99961	368 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	CAPS2	Q9BXY5	557 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	TPSD1	Q9BZJ3	242 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SLC13A1	Q9BZW2	595 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	CCDC68	Q9H2F9	335 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SMOC2	Q9H3U7	446 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	PLEKHA5	Q9HAU0	1116 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	MRPS18A	Q9NVS2	196 aa	Known RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	TAGLN3	Q9UI15	199 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	FBXL5	Q9UKA1	691 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SNX5	Q9Y5X3	404 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	MRFAP1	Q9Y605	127 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SQOR	Q9Y6N5	450 aa		4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734	SPAG9	O60271	1321 aa	Known RBP	4.14	□□□□□ -1.75
UBE2A-208	ENST00000628734		A6NCN8	305 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF785	A8K8V0	405 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	TARM1	B6A8C7	271 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	RASA4B	C9J798	803 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734		F5H697	171 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	RASA4	O43374	803 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	INMT	O95050	263 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	CYP1A2	P05177	515 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	MYL1	P05976	194 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	HSPA1A	P0DMV8	641 aa	Known RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	HSPA1B	P0DMV9	641 aa	Known RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	NR2F6	P10588	404 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	RARB	P10826	455 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	CYP11B2	P19099	503 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	PRDX5	P30044	214 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	HPD	P32754	393 aa	Predicted RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	UBA7	P41226	1012 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	MATR3	P43243	847 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	PIK3CG	P48736	1102 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF135	P52742	658 aa	Predicted RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	RCAN1	P53805	252 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	CTAG1A	P78358	180 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	NUCB1	Q02818	461 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	ICA1	Q05084	483 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	PPP2R5C	Q13362	524 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	BMPR2	Q13873	1038 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	RBBP5	Q15291	538 aa	Known RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.13	□□□□□ -1.75	4e-6	■■■■□ 24.9
UBE2A-208	ENST00000628734	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	CCDC152	Q4G0S7	254 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	PLAC9	Q5JTB6	97 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	SLC10A5	Q5PT55	438 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	HYI	Q5T013	277 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	ARMC4	Q5T2S8	1044 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	RBM20	Q5T481	1227 aa	Known RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	RUSC1-AS1	Q66K80	236 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	GALNT17	Q6IS24	598 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	ERAP2	Q6P179	960 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	MTHFD1L	Q6UB35	978 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	ARMC9	Q7Z3E5	817 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	KRT222	Q8N1A0	295 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	CAMKK1	Q8N5S9	505 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	PPHLN1	Q8NEY8	458 aa	Known RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	ANKRD20A12P	Q8NF67	263 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	SKA1	Q96BD8	255 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	REPS1	Q96D71	796 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	C1orf74	Q96LT6	269 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	ACTRT3	Q9BYD9	372 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	LRRCC1	Q9C099	1032 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	SIK2	Q9H0K1	926 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	TAOK3	Q9H2K8	898 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	PDRG1	Q9NUG6	133 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	MRGBP	Q9NV56	204 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	PSD3	Q9NYI0	1048 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	SEPT10	Q9P0V9	454 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	LUZP4	Q9P127	313 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	NR2E3	Q9Y5X4	410 aa		4.13	□□□□□ -1.75
UBE2A-208	ENST00000628734	C2orf81	A6NN90	581 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	TP73	O15350	636 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	TSPAN6	O43657	245 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	SNUPN	O95149	360 aa	Known RBP	4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	NXPH3	O95157	252 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	ARIH2	O95376	493 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	EBLN1	P0CF75	366 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	JUP	P14923	745 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	ATF7	P17544	494 aa	Predicted RBP	4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	ITGAL	P20701	1170 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	CCKBR	P32239	447 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	RDX	P35241	583 aa	Known RBP	4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	NUCB2	P80303	420 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZBTB17	Q13105	803 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	CNGA3	Q16281	694 aa		4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	CLPP	Q16740	277 aa	Predicted RBP	4.12	□□□□□ -1.75
UBE2A-208	ENST00000628734	KIAA0753	Q2KHM9	967 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms