RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 C10orf120Q5SQS8 335 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 PIGZQ86VD9 579 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 ARHGAP18Q8N392 663 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 USP33Q8TEY7 942 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 HHIPQ96QV1 700 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 SPHK2Q9NRA0 654 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 HESX1Q9UBX0 185 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 TSPAN16Q9UKR8 245 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 KIAA1257Q9ULG3 409 aa18.09■□□□□ 0.49
SPTAN1-214ENST00000628614 DMXL1Q9Y485 3027 aa18.08■□□□□ 0.49
SPTAN1-214ENST00000628614 KAT7O95251 611 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 APBB3O95704 486 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 RETP07949 1114 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 VDRP11473 427 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 CD19P15391 556 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 HOXC13P31276 330 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 GRIA2P42262 883 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 PLA2G4AP47712 749 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 SLC6A11P48066 632 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 PXNP49023 591 aaPredicted RBP18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 SEC13P55735 322 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 MARSP56192 900 aaKnown RBP18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 STX17P56962 302 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 MRPS21P82921 87 aaKnown RBP18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 RAB41Q5JT25 222 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 SCD5Q86SK9 330 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 C12orf40Q86WS4 652 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 TTC30AQ86WT1 665 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 TRIM59Q8IWR1 403 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 UBR7Q8N806 425 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 GAB3Q8WWW8 586 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 WBP2Q969T9 261 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 ARHGEF4Q9NR80 690 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 POLR3BQ9NW08 1133 aaPredicted RBP18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 KIAA1468Q9P260 1216 aa18.08■□□□□ 0.48
SPTAN1-214ENST00000628614 XPO1O14980 1071 aaKnown RBP18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 MDM4O15151 490 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 AXIN1O15169 862 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 GREM1O60565 184 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 LRP3O75074 770 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 RPP40O75818 363 aaKnown RBP18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 PAEPP09466 180 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 KDSRQ06136 332 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 BST2Q10589 180 aaKnown RBP18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 ANO4Q32M45 955 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 HSF5Q4G112 596 aaPredicted RBP18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 C2orf27AQ580R0 203 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 ETFBKMTQ8IXQ9 262 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 PPM1KQ8N3J5 372 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 SRRTQ9BXP5 876 aaKnown RBP18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 EBF1Q9UH73 591 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 NUDT5Q9UKK9 219 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 MMP17Q9ULZ9 603 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 USP18Q9UMW8 372 aa18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.07■□□□□ 0.48
SPTAN1-214ENST00000628614 DCHS1Q96JQ0 3298 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 A0A0A0MRY4 1105 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 AFPP02771 609 aaKnown RBP18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 SETSIPP0DME0 302 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 CCDC192P0DO97 292 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 TNFRSF4P43489 277 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 TKTL1P51854 596 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 COG7P83436 770 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 PDE4CQ08493 712 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 KCNH2Q12809 1159 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 CAMK4Q16566 473 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 TMEM270Q6UE05 265 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 NUDT18Q6ZVK8 323 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 TMEM25Q86YD3 366 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 TSTD1Q8NFU3 115 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 LMO3Q8TAP4 145 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 LRRC4Q9HBW1 653 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 DEC1Q9P2X7 70 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 ZNF510Q9Y2H8 683 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 PCDHB4Q9Y5E5 795 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 KIAA1549LQ6ZVL6 1849 aa18.06■□□□□ 0.48
SPTAN1-214ENST00000628614 SPTBN4Q9H254 2564 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 O00370 1275 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 ZBED1O96006 694 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 YWHAGP61981 247 aaKnown RBP eCLIP18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 GCNT1Q02742 428 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 LMNB2Q03252 620 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 MESP2Q0VG99 397 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 STILQ15468 1287 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 RSRC2Q7L4I2 434 aaKnown RBP18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 CACNA2D4Q7Z3S7 1137 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 MIB1Q86YT6 1006 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 PHTF2Q8N3S3 785 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 FAM160A2Q8N612 972 aaPredicted RBP18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 NAT16Q8N8M0 369 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 XPO6Q96QU8 1125 aaKnown RBP18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 MARK1Q9P0L2 795 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 WDR35Q9P2L0 1181 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 RWDD2AQ9UIY3 292 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 RASAL2Q9UJF2 1139 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 STRIP2Q9ULQ0 834 aa18.05■□□□□ 0.48
SPTAN1-214ENST00000628614 DNAH14Q0VDD8 3507 aa18.04■□□□□ 0.48
SPTAN1-214ENST00000628614 TBC1D3BA6NDS4 549 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms