RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 VN1R3Q9BXE9 311 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 ULBP1Q9BZM6 244 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 EPC1Q9H2F5 836 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 DMAP1Q9NPF5 467 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 RBM12Q9NTZ6 932 aaKnown RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 KLHL11Q9NVR0 708 aa10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 ABI2Q9NYB9 513 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 MRPL42Q9Y6G3 142 aaKnown RBP10.4□□□□□ -0.74
SOX2-OT-244ENST00000627738 NLRC5Q86WI3 1866 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 DYNC1I1O14576 645 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 TBC1D4O60343 1298 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 HSF2BPO75031 334 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 DAB1O75553 588 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 RNF8O76064 485 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 FBXO21O94952 628 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 EFEMP2O95967 443 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 RHOXF2BP0C7M4 288 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 CPB1P15086 417 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 SYN1P17600 705 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 LAG3P18627 525 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 MIPP30301 263 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 DAOAP59103 153 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 TUBB4BP68371 445 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 ATP11AP98196 1134 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 SLC25A11Q02978 314 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 ACAP1Q15027 740 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 HADHQ16836 314 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 CDO1Q16878 200 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 USP41Q3LFD5 358 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 RAB6CQ53S08 254 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 ZFYVE27Q5T4F4 411 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 SH3PXD2AQ5TCZ1 1133 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 LRRC38Q5VT99 294 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 RSPO2Q6UXX9 243 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 ANKS3Q6ZW76 656 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 ARCQ7LC44 396 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 ADAT2Q7Z6V5 191 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 SLC13A5Q86YT5 568 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 SCN4BQ8IWT1 228 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 RNF168Q8IYW5 571 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 DEFB106AQ8N104 65 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 SLC39A11Q8N1S5 342 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 COLGALT1Q8NBJ5 622 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 RIN2Q8WYP3 895 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 FAM149B1Q96BN6 582 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 FUBP3Q96I24 572 aaKnown RBP eCLIP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 PGLYRP2Q96PD5 576 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 NAP1L3Q99457 506 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 RHOXF2Q9BQY4 288 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 OCSTAMPQ9BR26 566 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 PLVAPQ9BX97 442 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 AP1M1Q9BXS5 423 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 RAB6CQ9H0N0 254 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 ZWILCHQ9H900 591 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 CNGB3Q9NQW8 809 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 PCSK1NQ9UHG2 260 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 PCDHB5Q9Y5E4 795 aa10.39□□□□□ -0.75
SOX2-OT-244ENST00000627738 KRIT1O00522 736 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 ZRANB2O95218 330 aaKnown RBP eCLIP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 GJB5O95377 273 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 TRUB2O95900 331 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 ZBED1O96006 694 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 KRT1P04264 644 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 USP17L7P0C7H9 530 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 IL1R2P27930 398 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 PCK1P35558 622 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 PTPN9P43378 593 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 GPR15P49685 360 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 SH3BP2P78314 561 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 IFRD2Q12894 506 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 GPR17Q13304 367 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 SMC1AQ14683 1233 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 LLGL1Q15334 1064 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 CLUL1Q15846 466 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 PSMD5Q16401 504 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 TMEM240Q5SV17 173 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 PSRC1Q6PGN9 363 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 HFE2Q6ZVN8 426 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 POLNQ7Z5Q5 900 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 CCDC50Q8IVM0 306 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 KLHL7Q8IXQ5 586 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 RCOR2Q8IZ40 523 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 GPR161Q8N6U8 529 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 EXD1Q8NHP7 514 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 FAM172AQ8WUF8 416 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 ACSF2Q96CM8 615 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 TMEM169Q96HH4 297 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 KRT12Q99456 494 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 DDX23Q9BUQ8 820 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 PNPLA8Q9NP80 782 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 NGRNQ9NPE2 291 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 DDX56Q9NY93 547 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 CXXC1Q9P0U4 656 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 ZMYND8Q9ULU4 1186 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 USP18Q9UMW8 372 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 NR2E1Q9Y466 385 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 PTPRDP23468 1912 aa10.38□□□□□ -0.75
SOX2-OT-244ENST00000627738 PTPRSQ13332 1948 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms