RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 HEY1Q9Y5J3 304 aa20.18■□□□□ 0.82
LAPTM4B-204ENST00000619747 ALADP13716 330 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 RGS2P41220 211 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 CAV1Q03135 178 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 MTA1Q13330 715 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 LRRC23Q53EV4 343 aaPredicted RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 ANKRD22Q5VYY1 191 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 APBB1IPQ7Z5R6 666 aaPredicted RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 SAPCD2Q86UD0 394 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 ZBED8Q8IZ13 594 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 CMASQ8NFW8 434 aaPredicted RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 SLC35F5Q8WV83 523 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 KBTBD7Q8WVZ9 684 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 CNTN3Q9P232 1028 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 RBP3P10745 1247 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 EIF3EP60228 445 aaKnown RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 PURAQ00577 322 aaKnown RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 CA9Q16790 459 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 OLFML1Q6UWY5 402 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 CYP4V2Q6ZWL3 525 aaPredicted RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 SMG8Q8ND04 991 aaKnown RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 SLC2A14Q8TDB8 520 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 TMEM165Q9HC07 324 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 KCNK9Q9NPC2 374 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 STK38LQ9Y2H1 464 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 HAS3O00219 553 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 PDHA1P08559 390 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 BBS12Q6ZW61 710 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 TRPV1Q8NER1 839 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 KHSRPQ92945 711 aaKnown RBP eCLIP20.17■□□□□ 0.825e-8■■■■□ 25
LAPTM4B-204ENST00000619747 NKD2Q969F2 451 aaPredicted RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 KIAA1257Q9ULG3 409 aa20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 DRG1Q9Y295 367 aaKnown RBP20.17■□□□□ 0.82
LAPTM4B-204ENST00000619747 MANSC4A6NHS7 340 aaPredicted RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 POC1B-GALNT4F8VUJ3 575 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 CLDN5O00501 218 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 AGTP01019 485 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 ITGAVP06756 1048 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 NQO1P15559 274 aaKnown RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 KRT81Q14533 505 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 ANKRD42Q8N9B4 389 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 BBOF1Q8ND07 529 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 USP6NLQ92738 828 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 LPPQ93052 612 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 WNT8BQ93098 351 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 CHMP6Q96FZ7 201 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 PRMT1Q99873 361 aaKnown RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 ZNF232Q9UNY5 417 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 TIMM13Q9Y5L4 95 aaPredicted RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 TCRBV7S3A2A0A539 114 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 CFAP73A6NFT4 308 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 ZSCAN9O15535 394 aaPredicted RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 STAU1O95793 577 aaKnown RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 ATP2A2P16615 1042 aaKnown RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 SDC4P31431 198 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 MMP13P45452 471 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 CDC42EP1Q00587 391 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 PDIA2Q13087 525 aaKnown RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 PKDCCQ504Y2 493 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 ANO7Q6IWH7 933 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 RGMBQ6NW40 437 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 DRICH1Q6PGQ1 229 aaPredicted RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 KIF2BQ8N4N8 673 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 ZCCHC9Q8N567 271 aaKnown RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 ANKS4BQ8N8V4 417 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 FAM129AQ9BZQ8 928 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 VPS37BQ9H9H4 285 aa20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 INTS9Q9NV88 658 aaKnown RBP20.16■□□□□ 0.82
LAPTM4B-204ENST00000619747 SYNJ2BP-COX16A0A087WUM0 186 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 PIRO00625 290 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 IMPDH2P12268 514 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 POLE2P56282 527 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 BASP1P80723 227 aaKnown RBP20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 SLC6A3Q01959 620 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 TRIM32Q13049 653 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 CUL3Q13618 768 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 LRRC52Q8N7C0 313 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 APPL2Q8NEU8 664 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 TRIM4Q9C037 500 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 COX16Q9P0S2 106 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 GSTA1P08263 222 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 RPL22P35268 128 aaKnown RBP20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 MAGEA8P43361 318 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 DARS2Q6PI48 645 aaKnown RBP20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 RNF169Q8NCN4 708 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 XPO6Q96QU8 1125 aaKnown RBP20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 SYT15Q9BQS2 421 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 DERAQ9Y315 318 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 PCDHGA4Q9Y5G9 962 aa20.15■□□□□ 0.82
LAPTM4B-204ENST00000619747 PTPN7P35236 360 aa20.14■□□□□ 0.82
LAPTM4B-204ENST00000619747 LILRA4P59901 499 aa20.14■□□□□ 0.82
LAPTM4B-204ENST00000619747 DPYSL3Q14195 570 aa20.14■□□□□ 0.82
LAPTM4B-204ENST00000619747 RNASEH2BQ5TBB1 312 aaKnown RBP20.14■□□□□ 0.82
LAPTM4B-204ENST00000619747 SRRM1Q8IYB3 904 aaKnown RBP20.14■□□□□ 0.82
LAPTM4B-204ENST00000619747 NETO2Q8NC67 525 aa20.14■□□□□ 0.82
LAPTM4B-204ENST00000619747 PLEKHG4BQ96PX9 1271 aa20.14■□□□□ 0.82
LAPTM4B-204ENST00000619747 APBA2Q99767 749 aa20.14■□□□□ 0.82
LAPTM4B-204ENST00000619747 ABCF3Q9NUQ8 709 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms