RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 BBS4Q96RK4 519 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SH3GL3Q99963 347 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 DDX47Q9H0S4 455 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 KLHL1Q9NR64 748 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CDY1Q9Y6F8 540 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CYP2C8P10632 490 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 TFPIP10646 304 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SUZ12Q15022 739 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 PROSER3Q2NL68 480 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CCDC33Q8N5R6 958 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 WDR36Q8NI36 951 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 STRBPQ96SI9 672 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 RSAD1Q9HA92 442 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 MRPL39Q9NYK5 338 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 DNAJC5BQ9UF47 199 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SHOC2Q9UQ13 582 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 KLHL20Q9Y2M5 609 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 VGLL3A8MV65 326 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SCN2BO60939 215 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SCRN3Q0VDG4 424 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SLFNL1Q499Z3 407 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 PDGFDQ9GZP0 370 aaPredicted RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 LDAHQ9H6V9 325 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 MRPL17Q9NRX2 175 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 ABHD10Q9NUJ1 306 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SIRPGQ9P1W8 387 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 PRKAG3Q9UGI9 489 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 RNF112Q9ULX5 631 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 UBQLN1Q9UMX0 589 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 KDM5DQ9BY66 1539 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 GTPBP1O00178 669 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SPATA31D3P0C874 917 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 GPD1P21695 349 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 NUDT2P50583 147 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CAPZA1P52907 286 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 RPS6P62753 249 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SPATA31D4Q6ZUB0 917 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 RBBP8NLQ8NC74 664 aaPredicted RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CCDC54Q8NEL0 328 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CASP10Q92851 521 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 CNDP1Q96KN2 507 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 SIKE1Q9BRV8 207 aa12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-204ENST00000613060 PMPCBO75439 489 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 ERFP50548 548 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 KRR1Q13601 381 aaKnown RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 CLPBQ9H078 707 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 PSMC3IPQ9P2W1 217 aaPredicted RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 OR10H1Q9Y4A9 318 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 STK36Q9NRP7 1315 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 PDXKO00764 312 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 USP1O94782 785 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 FOSL2P15408 326 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 WASP42768 502 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 RCAN1P53805 252 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 STX5Q13190 355 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 IZUMO1Q8IYV9 350 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 GUF1Q8N442 669 aaKnown RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 CHST13Q8NET6 341 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 RERGQ96A58 199 aaPredicted RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 PXMP2Q9NR77 195 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 TRIM49BA6NDI0 452 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 DDNO94850 711 aaPredicted RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 UQCRBP14927 111 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 PRDX5P30044 214 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 MRPS25P82663 173 aaKnown RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 TAS1R3Q7RTX0 852 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 RASGEF1AQ8N9B8 481 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 INTS7Q9NVH2 962 aaKnown RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 TMEM191CA6NGB0 347 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 PDHXO00330 501 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 AIM2O14862 343 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 GNRH1P01148 92 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 AGAP9Q5VTM2 703 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 ZNF655Q8N720 491 aaPredicted RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 ZNF611Q8N823 705 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 RNFT2Q96EX2 444 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 DEFB118Q96PH6 123 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 VIPAS39Q9H9C1 493 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 GRID1Q9ULK0 1009 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 MINPP1Q9UNW1 487 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 TRBV23OR9-2A0A075B6M9 112 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 M0QYT0 321 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 RGS5O15539 181 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 IL1R1P14778 569 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 NOS2P35228 1153 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 PURAQ00577 322 aaKnown RBP12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 MCEEQ96PE7 176 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 SLITRK2Q9H156 845 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 GOLPH3Q9H4A6 298 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
SLC6A6-204ENST00000613060 TBC1D3DA0A087WVF3 549 aa12.38□□□□□ -0.43
SLC6A6-204ENST00000613060 TBC1D3IA0A087WXS9 549 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms