RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 HTR3DQ70Z44 454 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 APTXQ7Z2E3 356 aaKnown RBP14.99□□□□□ -0.01
HDDC2-209ENST00000609477 ADGRG2Q8IZP9 1017 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 RIN3Q8TB24 985 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 TRIM62Q9BVG3 475 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 LSM14BQ9BX40 385 aaKnown RBP14.99□□□□□ -0.01
HDDC2-209ENST00000609477 KLF16Q9BXK1 252 aaPredicted RBP14.99□□□□□ -0.01
HDDC2-209ENST00000609477 ULBP1Q9BZM6 244 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 EBF3Q9H4W6 596 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 ECT2Q9H8V3 914 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 HPS4Q9NQG7 708 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 ABCC13Q9NSE7 274 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 OSER1Q9NX31 292 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 CFAP97Q9P2B7 532 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 SH3BP1Q9Y3L3 701 aa14.99□□□□□ -0.01
HDDC2-209ENST00000609477 ZDBF2Q9HCK1 2354 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 SHISA7A6NL88 538 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 GALR2O43603 387 aaPredicted RBP14.98□□□□□ -0.01
HDDC2-209ENST00000609477 PI15O43692 258 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 CLCN1P35523 988 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 KRT9P35527 623 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 PGFP49763 221 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 DAOAP59103 153 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 TNK2Q07912 1038 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 RAPGEF1Q13905 1077 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 UBXN2BQ14CS0 331 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 ZSCAN23Q3MJ62 389 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 FILIP1LQ4L180 1135 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 DGKKQ5KSL6 1271 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 C10orf120Q5SQS8 335 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 BTBD8Q5XKL5 378 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 MAMSTRQ6ZN01 415 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 BEND5Q7L4P6 421 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 TMEM110Q86TL2 294 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 FMNL3Q8IVF7 1028 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 CCDC105Q8IYK2 499 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 ZNF687Q8N1G0 1237 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 SYNPOQ8N3V7 929 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 GOLGA1Q92805 767 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 NOX5Q96PH1 765 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 SLC4A5Q9BY07 1137 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 GANQ9H2C0 597 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 SMPD4Q9NXE4 827 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 DLGAP2Q9P1A6 1054 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 LSM7Q9UK45 103 aaKnown RBP14.98□□□□□ -0.01
HDDC2-209ENST00000609477 STRIP2Q9ULQ0 834 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 ZNF510Q9Y2H8 683 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 SIK3Q9Y2K2 1263 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 CEP83Q9Y592 693 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 FHOD1Q9Y613 1164 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 MIA3Q5JRA6 1907 aa14.98□□□□□ -0.01
HDDC2-209ENST00000609477 F8VZ95 297 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 TRDMT1O14717 391 aaKnown RBP14.97□□□□□ -0.01
HDDC2-209ENST00000609477 LCP1P13796 627 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 LRRC32Q14392 662 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 SYCP1Q15431 976 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 BSPRYQ5W0U4 402 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 RSRC2Q7L4I2 434 aaKnown RBP14.97□□□□□ -0.01
HDDC2-209ENST00000609477 BHLHA9Q7RTU4 235 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 ZNF677Q86XU0 584 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 DTWD2Q8NBA8 298 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 NEK11Q8NG66 645 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 CCDC26Q8TAB7 109 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 RNF139Q8WU17 664 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 FOXQ1Q9C009 403 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 DCLK3Q9C098 648 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 AJAP1Q9UKB5 411 aaPredicted RBP14.97□□□□□ -0.01
HDDC2-209ENST00000609477 WNT6Q9Y6F9 365 aa14.97□□□□□ -0.01
HDDC2-209ENST00000609477 YJEFN3A6XGL0 299 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 E7ENQ6 273 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 TBX18O95935 607 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 ADH1CP00326 375 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 ATP1A3P13637 1013 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 ARSAP15289 507 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 CYP11B1P15538 503 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 CD72P21854 359 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 TARSP26639 723 aaKnown RBP14.96□□□□□ -0.01
HDDC2-209ENST00000609477 GJA4P35212 333 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 EIF2DP41214 584 aaKnown RBP14.96□□□□□ -0.01
HDDC2-209ENST00000609477 RGS7P49802 495 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 PTPN5P54829 565 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 FZD5Q13467 585 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 DENND1BQ6P3S1 775 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 SLC47A2Q86VL8 602 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 PCMTD1Q96MG8 357 aaPredicted RBP14.96□□□□□ -0.01
HDDC2-209ENST00000609477 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 LINC00597Q9H2U6 94 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 ACP6Q9NPH0 428 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
HDDC2-209ENST00000609477 ST7Q9NRC1 585 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 FAM207AQ9NSI2 230 aaPredicted RBP14.96□□□□□ -0.01
HDDC2-209ENST00000609477 MARCH2Q9P0N8 246 aa14.96□□□□□ -0.01
HDDC2-209ENST00000609477 F5P12259 2224 aa14.95□□□□□ -0.02
HDDC2-209ENST00000609477 OTOL1A6NHN0 477 aaPredicted RBP14.95□□□□□ -0.02
HDDC2-209ENST00000609477 GABBR2O75899 941 aa14.95□□□□□ -0.02
HDDC2-209ENST00000609477 CALCAP01258 141 aa14.95□□□□□ -0.02
HDDC2-209ENST00000609477 LTFP02788 710 aa14.95□□□□□ -0.02
HDDC2-209ENST00000609477 GLI1P08151 1106 aa14.95□□□□□ -0.02
HDDC2-209ENST00000609477 CCDC172P0C7W6 258 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms